Protein–RNA interactions for Protein: Q99698

LYST, Lysosomal-trafficking regulator, humanhuman

Predictions only

Length 3,801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSTQ99698 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LYSTQ99698 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC11.32□□□□□ -0.6
LYSTQ99698 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC11.32□□□□□ -0.6
LYSTQ99698 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC11.32□□□□□ -0.6
LYSTQ99698 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC11.32□□□□□ -0.6
LYSTQ99698 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
LYSTQ99698 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC11.32□□□□□ -0.6
LYSTQ99698 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LYSTQ99698 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LYSTQ99698 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
LYSTQ99698 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LYSTQ99698 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC11.32□□□□□ -0.6
LYSTQ99698 DUX4L45-201ENST00000566406 1057 ntBASIC11.32□□□□□ -0.6
LYSTQ99698 DERL2-202ENST00000570848 657 ntTSL 5 BASIC11.32□□□□□ -0.6
LYSTQ99698 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC11.32□□□□□ -0.6
LYSTQ99698 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
LYSTQ99698 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC11.32□□□□□ -0.6
LYSTQ99698 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LYSTQ99698 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
LYSTQ99698 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC11.32□□□□□ -0.6
LYSTQ99698 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LYSTQ99698 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LYSTQ99698 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC11.32□□□□□ -0.6
LYSTQ99698 GNE-204ENST00000539208 2190 ntTSL 2 BASIC11.32□□□□□ -0.6
LYSTQ99698 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
LYSTQ99698 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LYSTQ99698 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LYSTQ99698 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LYSTQ99698 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC11.32□□□□□ -0.6
LYSTQ99698 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
LYSTQ99698 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC11.32□□□□□ -0.6
LYSTQ99698 AC079328.1-201ENST00000560358 952 ntBASIC11.32□□□□□ -0.6
LYSTQ99698 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC11.32□□□□□ -0.6
LYSTQ99698 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
LYSTQ99698 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
LYSTQ99698 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC11.32□□□□□ -0.6
LYSTQ99698 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC11.32□□□□□ -0.6
LYSTQ99698 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC11.32□□□□□ -0.6
LYSTQ99698 AC005052.1-201ENST00000625181 2492 ntBASIC11.32□□□□□ -0.6
LYSTQ99698 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LYSTQ99698 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC11.32□□□□□ -0.6
LYSTQ99698 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
LYSTQ99698 AC007969.1-201ENST00000433675 447 ntBASIC11.32□□□□□ -0.6
LYSTQ99698 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC11.32□□□□□ -0.6
LYSTQ99698 CHMP4BP1-201ENST00000556017 588 ntBASIC11.32□□□□□ -0.6
LYSTQ99698 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC11.32□□□□□ -0.6
LYSTQ99698 SPCS2P2-201ENST00000603270 608 ntBASIC11.32□□□□□ -0.6
LYSTQ99698 AC009542.2-202ENST00000619004 1067 ntBASIC11.32□□□□□ -0.6
LYSTQ99698 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LYSTQ99698 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LYSTQ99698 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LYSTQ99698 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC11.32□□□□□ -0.6
LYSTQ99698 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LYSTQ99698 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LYSTQ99698 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
LYSTQ99698 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LYSTQ99698 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LYSTQ99698 RN7SL618P-201ENST00000477850 296 ntBASIC11.31□□□□□ -0.6
LYSTQ99698 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC11.31□□□□□ -0.6
LYSTQ99698 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC11.31□□□□□ -0.6
LYSTQ99698 AC061975.2-201ENST00000581722 295 ntBASIC11.31□□□□□ -0.6
LYSTQ99698 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC11.31□□□□□ -0.6
LYSTQ99698 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC11.31□□□□□ -0.6
LYSTQ99698 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC11.31□□□□□ -0.6
LYSTQ99698 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
LYSTQ99698 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
LYSTQ99698 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC11.31□□□□□ -0.6
LYSTQ99698 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LYSTQ99698 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
LYSTQ99698 RPS19-201ENST00000221975 500 ntTSL 3 BASIC11.31□□□□□ -0.6
LYSTQ99698 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
LYSTQ99698 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC11.31□□□□□ -0.6
LYSTQ99698 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
LYSTQ99698 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC11.31□□□□□ -0.6
LYSTQ99698 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC11.31□□□□□ -0.6
LYSTQ99698 AC114501.2-201ENST00000439631 535 ntBASIC11.31□□□□□ -0.6
LYSTQ99698 REEP1-202ENST00000453231 940 ntTSL 2 BASIC11.31□□□□□ -0.6
LYSTQ99698 TMEM198B-204ENST00000484016 896 ntBASIC11.31□□□□□ -0.6
LYSTQ99698 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LYSTQ99698 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC11.31□□□□□ -0.6
LYSTQ99698 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
LYSTQ99698 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LYSTQ99698 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC11.31□□□□□ -0.6
LYSTQ99698 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC11.31□□□□□ -0.6
LYSTQ99698 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC11.31□□□□□ -0.6
LYSTQ99698 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LYSTQ99698 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
LYSTQ99698 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LYSTQ99698 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LYSTQ99698 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LYSTQ99698 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
LYSTQ99698 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LYSTQ99698 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LYSTQ99698 FADS2-212ENST00000522639 360 ntTSL 5 BASIC11.31□□□□□ -0.6
LYSTQ99698 NEU3-203ENST00000529024 581 ntTSL 3 BASIC11.31□□□□□ -0.6
LYSTQ99698 AP000812.2-201ENST00000538934 718 ntBASIC11.31□□□□□ -0.6
LYSTQ99698 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC11.31□□□□□ -0.6
LYSTQ99698 FADS2-215ENST00000574708 385 ntTSL 3 BASIC11.31□□□□□ -0.6
LYSTQ99698 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
LYSTQ99698 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms