Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NDNQ99608 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
NDNQ99608 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NDNQ99608 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NDNQ99608 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NDNQ99608 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NDNQ99608 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NDNQ99608 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.72■□□□□ 0.27
NDNQ99608 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NDNQ99608 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.72■□□□□ 0.27
NDNQ99608 DUSP5P1-201ENST00000441325 1139 ntBASIC16.72■□□□□ 0.27
NDNQ99608 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.72■□□□□ 0.27
NDNQ99608 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
NDNQ99608 RPS15P9-201ENST00000494093 319 ntBASIC16.72■□□□□ 0.27
NDNQ99608 RNPS1P1-201ENST00000507437 918 ntBASIC16.72■□□□□ 0.27
NDNQ99608 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.72■□□□□ 0.27
NDNQ99608 OR7E14P-202ENST00000530490 1290 ntBASIC16.72■□□□□ 0.27
NDNQ99608 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.72■□□□□ 0.27
NDNQ99608 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.72■□□□□ 0.27
NDNQ99608 AC013467.2-201ENST00000605472 835 ntBASIC16.72■□□□□ 0.27
NDNQ99608 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.72■□□□□ 0.27
NDNQ99608 REXO1L3P-201ENST00000622202 1288 ntBASIC16.72■□□□□ 0.27
NDNQ99608 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.72■□□□□ 0.27
NDNQ99608 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
NDNQ99608 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
NDNQ99608 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
NDNQ99608 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NDNQ99608 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.72■□□□□ 0.27
NDNQ99608 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NDNQ99608 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
NDNQ99608 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
NDNQ99608 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC16.72■□□□□ 0.27
NDNQ99608 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
NDNQ99608 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
NDNQ99608 AL671710.1-201ENST00000610245 2349 ntBASIC16.71■□□□□ 0.27
NDNQ99608 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.71■□□□□ 0.27
NDNQ99608 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NDNQ99608 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
NDNQ99608 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
NDNQ99608 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.71■□□□□ 0.27
NDNQ99608 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NDNQ99608 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
NDNQ99608 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
NDNQ99608 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NDNQ99608 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NDNQ99608 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
NDNQ99608 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.71■□□□□ 0.27
NDNQ99608 KRT18P27-201ENST00000427733 1299 ntBASIC16.71■□□□□ 0.27
NDNQ99608 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.71■□□□□ 0.27
NDNQ99608 HNRNPDP1-201ENST00000439535 754 ntBASIC16.71■□□□□ 0.27
NDNQ99608 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.71■□□□□ 0.27
NDNQ99608 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
NDNQ99608 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.71■□□□□ 0.27
NDNQ99608 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.71■□□□□ 0.27
NDNQ99608 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.71■□□□□ 0.27
NDNQ99608 MPDU1-223ENST00000582151 728 ntBASIC16.71■□□□□ 0.27
NDNQ99608 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NDNQ99608 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NDNQ99608 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.71■□□□□ 0.27
NDNQ99608 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
NDNQ99608 AF228730.7-201ENST00000641842 219 ntBASIC16.71■□□□□ 0.27
NDNQ99608 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NDNQ99608 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
NDNQ99608 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.71■□□□□ 0.27
NDNQ99608 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
NDNQ99608 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
NDNQ99608 SNX33P1-201ENST00000592116 1762 ntBASIC16.71■□□□□ 0.27
NDNQ99608 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
NDNQ99608 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.71■□□□□ 0.27
NDNQ99608 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
NDNQ99608 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.71■□□□□ 0.27
NDNQ99608 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.71■□□□□ 0.26
NDNQ99608 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
NDNQ99608 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NDNQ99608 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NDNQ99608 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NDNQ99608 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.7■□□□□ 0.26
NDNQ99608 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.7■□□□□ 0.26
NDNQ99608 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NDNQ99608 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NDNQ99608 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
NDNQ99608 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.7■□□□□ 0.26
NDNQ99608 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
NDNQ99608 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NDNQ99608 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
NDNQ99608 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
NDNQ99608 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NDNQ99608 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.7■□□□□ 0.26
NDNQ99608 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NDNQ99608 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
NDNQ99608 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.7■□□□□ 0.26
NDNQ99608 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.7■□□□□ 0.26
NDNQ99608 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NDNQ99608 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
NDNQ99608 AC073621.1-201ENST00000392730 636 ntBASIC16.7■□□□□ 0.26
NDNQ99608 HLA-J-202ENST00000469281 1241 ntBASIC16.7■□□□□ 0.26
NDNQ99608 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.7■□□□□ 0.26
NDNQ99608 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.7■□□□□ 0.26
NDNQ99608 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.7■□□□□ 0.26
NDNQ99608 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms