Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC3BQ96PB8 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC3BQ96PB8 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
LRRC3BQ96PB8 DFFBP1-201ENST00000433250 979 ntBASIC16.82■□□□□ 0.28
LRRC3BQ96PB8 AC114501.2-201ENST00000439631 535 ntBASIC16.82■□□□□ 0.28
LRRC3BQ96PB8 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.82■□□□□ 0.28
LRRC3BQ96PB8 DOC2GP-202ENST00000514950 1163 ntBASIC16.82■□□□□ 0.28
LRRC3BQ96PB8 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
LRRC3BQ96PB8 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC3BQ96PB8 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.82■□□□□ 0.28
LRRC3BQ96PB8 AC024267.1-201ENST00000582320 895 ntBASIC16.82■□□□□ 0.28
LRRC3BQ96PB8 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC3BQ96PB8 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC3BQ96PB8 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
LRRC3BQ96PB8 IGHV3-72-202ENST00000621503 303 ntBASIC16.82■□□□□ 0.28
LRRC3BQ96PB8 AL033527.5-202ENST00000641632 1098 ntBASIC16.82■□□□□ 0.28
LRRC3BQ96PB8 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC3BQ96PB8 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.82■□□□□ 0.28
LRRC3BQ96PB8 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.82■□□□□ 0.28
LRRC3BQ96PB8 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC3BQ96PB8 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC3BQ96PB8 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
LRRC3BQ96PB8 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC3BQ96PB8 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
LRRC3BQ96PB8 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC3BQ96PB8 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRRC3BQ96PB8 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC3BQ96PB8 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC3BQ96PB8 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC3BQ96PB8 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
LRRC3BQ96PB8 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.81■□□□□ 0.28
LRRC3BQ96PB8 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC3BQ96PB8 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC3BQ96PB8 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.81■□□□□ 0.28
LRRC3BQ96PB8 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC3BQ96PB8 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC3BQ96PB8 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC3BQ96PB8 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC3BQ96PB8 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
LRRC3BQ96PB8 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
LRRC3BQ96PB8 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.81■□□□□ 0.28
LRRC3BQ96PB8 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.81■□□□□ 0.28
LRRC3BQ96PB8 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC3BQ96PB8 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC3BQ96PB8 AP002490.2-201ENST00000524791 560 ntBASIC16.81■□□□□ 0.28
LRRC3BQ96PB8 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC3BQ96PB8 WASH4P-201ENST00000564273 1246 ntBASIC16.81■□□□□ 0.28
LRRC3BQ96PB8 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.81■□□□□ 0.28
LRRC3BQ96PB8 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC3BQ96PB8 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC3BQ96PB8 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC3BQ96PB8 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
LRRC3BQ96PB8 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC3BQ96PB8 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC3BQ96PB8 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC3BQ96PB8 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC3BQ96PB8 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC3BQ96PB8 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRC3BQ96PB8 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.81■□□□□ 0.28
LRRC3BQ96PB8 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.8■□□□□ 0.28
LRRC3BQ96PB8 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC3BQ96PB8 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.8■□□□□ 0.28
LRRC3BQ96PB8 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC3BQ96PB8 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
LRRC3BQ96PB8 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
LRRC3BQ96PB8 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC3BQ96PB8 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC3BQ96PB8 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC3BQ96PB8 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC3BQ96PB8 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.8■□□□□ 0.28
LRRC3BQ96PB8 AL589987.1-201ENST00000453380 819 ntBASIC16.8■□□□□ 0.28
LRRC3BQ96PB8 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.8■□□□□ 0.28
LRRC3BQ96PB8 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.8■□□□□ 0.28
LRRC3BQ96PB8 AC008494.3-201ENST00000606615 944 ntBASIC16.8■□□□□ 0.28
LRRC3BQ96PB8 AC004461.2-201ENST00000629517 803 ntBASIC16.8■□□□□ 0.28
LRRC3BQ96PB8 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC3BQ96PB8 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
LRRC3BQ96PB8 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC3BQ96PB8 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
LRRC3BQ96PB8 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC3BQ96PB8 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC3BQ96PB8 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.8■□□□□ 0.28
LRRC3BQ96PB8 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.8■□□□□ 0.28
LRRC3BQ96PB8 AC006538.1-201ENST00000567905 1585 ntBASIC16.8■□□□□ 0.28
LRRC3BQ96PB8 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC3BQ96PB8 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC3BQ96PB8 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC3BQ96PB8 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.8■□□□□ 0.28
LRRC3BQ96PB8 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.8■□□□□ 0.28
LRRC3BQ96PB8 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC3BQ96PB8 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRC3BQ96PB8 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
LRRC3BQ96PB8 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.79■□□□□ 0.28
LRRC3BQ96PB8 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC3BQ96PB8 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC3BQ96PB8 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.79■□□□□ 0.28
LRRC3BQ96PB8 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.79■□□□□ 0.28
LRRC3BQ96PB8 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
LRRC3BQ96PB8 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC3BQ96PB8 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms