Protein–RNA interactions for Protein: Q96M43

NBPF4, Neuroblastoma breakpoint family member 4, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF4Q96M43 POLE2-203ENST00000553805 496 ntTSL 2 BASIC21.65■■□□□ 1.06
NBPF4Q96M43 AC132938.2-201ENST00000579188 680 ntBASIC21.65■■□□□ 1.06
NBPF4Q96M43 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
NBPF4Q96M43 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
NBPF4Q96M43 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
NBPF4Q96M43 5S_rRNA.22-201ENST00000614916 106 ntBASIC21.65■■□□□ 1.06
NBPF4Q96M43 AL591163.1-201ENST00000641757 987 ntBASIC21.65■■□□□ 1.06
NBPF4Q96M43 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NBPF4Q96M43 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NBPF4Q96M43 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NBPF4Q96M43 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NBPF4Q96M43 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NBPF4Q96M43 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NBPF4Q96M43 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
NBPF4Q96M43 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NBPF4Q96M43 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NBPF4Q96M43 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
NBPF4Q96M43 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
NBPF4Q96M43 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC21.65■■□□□ 1.06
NBPF4Q96M43 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
NBPF4Q96M43 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NBPF4Q96M43 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NBPF4Q96M43 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.06
NBPF4Q96M43 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
NBPF4Q96M43 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC21.64■■□□□ 1.06
NBPF4Q96M43 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
NBPF4Q96M43 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
NBPF4Q96M43 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
NBPF4Q96M43 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
NBPF4Q96M43 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NBPF4Q96M43 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC21.64■■□□□ 1.05
NBPF4Q96M43 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NBPF4Q96M43 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
NBPF4Q96M43 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC21.64■■□□□ 1.05
NBPF4Q96M43 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NBPF4Q96M43 GIMAP3P-201ENST00000495150 836 ntBASIC21.64■■□□□ 1.05
NBPF4Q96M43 AC093004.1-201ENST00000508850 424 ntBASIC21.64■■□□□ 1.05
NBPF4Q96M43 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
NBPF4Q96M43 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC21.64■■□□□ 1.05
NBPF4Q96M43 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC21.64■■□□□ 1.05
NBPF4Q96M43 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
NBPF4Q96M43 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NBPF4Q96M43 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
NBPF4Q96M43 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
NBPF4Q96M43 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NBPF4Q96M43 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
NBPF4Q96M43 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NBPF4Q96M43 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
NBPF4Q96M43 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NBPF4Q96M43 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NBPF4Q96M43 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NBPF4Q96M43 SLC7A15P-201ENST00000424028 1363 ntBASIC21.63■■□□□ 1.05
NBPF4Q96M43 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
NBPF4Q96M43 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NBPF4Q96M43 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NBPF4Q96M43 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NBPF4Q96M43 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC21.63■■□□□ 1.05
NBPF4Q96M43 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NBPF4Q96M43 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
NBPF4Q96M43 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
NBPF4Q96M43 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC21.63■■□□□ 1.05
NBPF4Q96M43 AC087499.6-201ENST00000411576 835 ntBASIC21.63■■□□□ 1.05
NBPF4Q96M43 ATP5G2P4-201ENST00000442175 420 ntBASIC21.63■■□□□ 1.05
NBPF4Q96M43 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC21.63■■□□□ 1.05
NBPF4Q96M43 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
NBPF4Q96M43 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC21.63■■□□□ 1.05
NBPF4Q96M43 HILS1-202ENST00000545329 423 ntBASIC21.63■■□□□ 1.05
NBPF4Q96M43 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC21.63■■□□□ 1.05
NBPF4Q96M43 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC21.63■■□□□ 1.05
NBPF4Q96M43 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
NBPF4Q96M43 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
NBPF4Q96M43 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC21.63■■□□□ 1.05
NBPF4Q96M43 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC21.63■■□□□ 1.05
NBPF4Q96M43 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
NBPF4Q96M43 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
NBPF4Q96M43 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC21.63■■□□□ 1.05
NBPF4Q96M43 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
NBPF4Q96M43 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
NBPF4Q96M43 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
NBPF4Q96M43 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC21.63■■□□□ 1.05
NBPF4Q96M43 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
NBPF4Q96M43 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NBPF4Q96M43 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
NBPF4Q96M43 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NBPF4Q96M43 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NBPF4Q96M43 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NBPF4Q96M43 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.62■■□□□ 1.05
NBPF4Q96M43 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
NBPF4Q96M43 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NBPF4Q96M43 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
NBPF4Q96M43 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NBPF4Q96M43 OSM-203ENST00000403463 464 ntTSL 3 BASIC21.62■■□□□ 1.05
NBPF4Q96M43 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC21.62■■□□□ 1.05
NBPF4Q96M43 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC21.62■■□□□ 1.05
NBPF4Q96M43 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NBPF4Q96M43 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC21.62■■□□□ 1.05
NBPF4Q96M43 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC21.62■■□□□ 1.05
NBPF4Q96M43 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NBPF4Q96M43 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NBPF4Q96M43 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms