Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SCAMP4Q969E2 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SCAMP4Q969E2 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.47■□□□□ 0.23
SCAMP4Q969E2 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCAMP4Q969E2 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SCAMP4Q969E2 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.47■□□□□ 0.23
SCAMP4Q969E2 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SCAMP4Q969E2 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SCAMP4Q969E2 AC005237.2-201ENST00000434368 219 ntBASIC16.47■□□□□ 0.23
SCAMP4Q969E2 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.47■□□□□ 0.23
SCAMP4Q969E2 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.47■□□□□ 0.23
SCAMP4Q969E2 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.47■□□□□ 0.23
SCAMP4Q969E2 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.47■□□□□ 0.23
SCAMP4Q969E2 LINC01225-203ENST00000563550 1244 ntBASIC16.47■□□□□ 0.23
SCAMP4Q969E2 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
SCAMP4Q969E2 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCAMP4Q969E2 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.47■□□□□ 0.23
SCAMP4Q969E2 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.47■□□□□ 0.23
SCAMP4Q969E2 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.47■□□□□ 0.23
SCAMP4Q969E2 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SCAMP4Q969E2 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SCAMP4Q969E2 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCAMP4Q969E2 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCAMP4Q969E2 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.47■□□□□ 0.23
SCAMP4Q969E2 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SCAMP4Q969E2 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCAMP4Q969E2 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.47■□□□□ 0.23
SCAMP4Q969E2 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.47■□□□□ 0.23
SCAMP4Q969E2 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.47■□□□□ 0.23
SCAMP4Q969E2 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCAMP4Q969E2 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SCAMP4Q969E2 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
SCAMP4Q969E2 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SCAMP4Q969E2 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCAMP4Q969E2 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.47■□□□□ 0.23
SCAMP4Q969E2 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCAMP4Q969E2 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.46■□□□□ 0.23
SCAMP4Q969E2 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.46■□□□□ 0.23
SCAMP4Q969E2 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.46■□□□□ 0.23
SCAMP4Q969E2 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCAMP4Q969E2 AC020916.1-201ENST00000587762 1774 ntBASIC16.46■□□□□ 0.23
SCAMP4Q969E2 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCAMP4Q969E2 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCAMP4Q969E2 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.46■□□□□ 0.23
SCAMP4Q969E2 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCAMP4Q969E2 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.46■□□□□ 0.23
SCAMP4Q969E2 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCAMP4Q969E2 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SCAMP4Q969E2 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCAMP4Q969E2 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SCAMP4Q969E2 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCAMP4Q969E2 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.46■□□□□ 0.23
SCAMP4Q969E2 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.46■□□□□ 0.23
SCAMP4Q969E2 AC027307.2-201ENST00000591252 911 ntBASIC16.46■□□□□ 0.23
SCAMP4Q969E2 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCAMP4Q969E2 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
SCAMP4Q969E2 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCAMP4Q969E2 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
SCAMP4Q969E2 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SCAMP4Q969E2 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCAMP4Q969E2 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC16.46■□□□□ 0.23
SCAMP4Q969E2 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCAMP4Q969E2 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SCAMP4Q969E2 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCAMP4Q969E2 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
SCAMP4Q969E2 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCAMP4Q969E2 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.46■□□□□ 0.23
SCAMP4Q969E2 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCAMP4Q969E2 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SCAMP4Q969E2 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SCAMP4Q969E2 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
SCAMP4Q969E2 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.45■□□□□ 0.22
SCAMP4Q969E2 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.45■□□□□ 0.22
SCAMP4Q969E2 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SCAMP4Q969E2 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.45■□□□□ 0.22
SCAMP4Q969E2 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCAMP4Q969E2 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.45■□□□□ 0.22
SCAMP4Q969E2 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCAMP4Q969E2 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.45■□□□□ 0.22
SCAMP4Q969E2 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCAMP4Q969E2 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCAMP4Q969E2 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCAMP4Q969E2 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SCAMP4Q969E2 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.45■□□□□ 0.22
SCAMP4Q969E2 AL627223.1-201ENST00000416693 442 ntBASIC16.45■□□□□ 0.22
SCAMP4Q969E2 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SCAMP4Q969E2 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.45■□□□□ 0.22
SCAMP4Q969E2 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.45■□□□□ 0.22
SCAMP4Q969E2 IGHV3-62-201ENST00000520057 340 ntBASIC16.45■□□□□ 0.22
SCAMP4Q969E2 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.45■□□□□ 0.22
SCAMP4Q969E2 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.45■□□□□ 0.22
SCAMP4Q969E2 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.45■□□□□ 0.22
SCAMP4Q969E2 PRORSD1P-202ENST00000563365 2154 ntBASIC16.45■□□□□ 0.22
SCAMP4Q969E2 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCAMP4Q969E2 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCAMP4Q969E2 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCAMP4Q969E2 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.45■□□□□ 0.22
SCAMP4Q969E2 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCAMP4Q969E2 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SCAMP4Q969E2 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms