Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 PKD1P5-201ENST00000532415 10291 ntBASIC14.56□□□□□ -0.08
CPEB3Q8NE35 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CPEB3Q8NE35 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
CPEB3Q8NE35 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CPEB3Q8NE35 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CPEB3Q8NE35 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.56□□□□□ -0.08
CPEB3Q8NE35 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.56□□□□□ -0.08
CPEB3Q8NE35 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
CPEB3Q8NE35 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.56□□□□□ -0.08
CPEB3Q8NE35 KRT19P2-202ENST00000557173 1012 ntBASIC14.56□□□□□ -0.08
CPEB3Q8NE35 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.56□□□□□ -0.08
CPEB3Q8NE35 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.56□□□□□ -0.08
CPEB3Q8NE35 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CPEB3Q8NE35 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
CPEB3Q8NE35 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CPEB3Q8NE35 BCAR1-209ENST00000546196 1340 ntBASIC14.56□□□□□ -0.08
CPEB3Q8NE35 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC14.56□□□□□ -0.08
CPEB3Q8NE35 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CPEB3Q8NE35 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CPEB3Q8NE35 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CPEB3Q8NE35 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.56□□□□□ -0.08
CPEB3Q8NE35 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CPEB3Q8NE35 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CPEB3Q8NE35 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CPEB3Q8NE35 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CPEB3Q8NE35 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
CPEB3Q8NE35 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CPEB3Q8NE35 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CPEB3Q8NE35 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.56□□□□□ -0.08
CPEB3Q8NE35 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.56□□□□□ -0.08
CPEB3Q8NE35 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.56□□□□□ -0.08
CPEB3Q8NE35 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CPEB3Q8NE35 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CPEB3Q8NE35 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CPEB3Q8NE35 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.55□□□□□ -0.08
CPEB3Q8NE35 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
CPEB3Q8NE35 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC14.55□□□□□ -0.08
CPEB3Q8NE35 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CPEB3Q8NE35 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CPEB3Q8NE35 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.55□□□□□ -0.08
CPEB3Q8NE35 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.55□□□□□ -0.08
CPEB3Q8NE35 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.55□□□□□ -0.08
CPEB3Q8NE35 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CPEB3Q8NE35 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC14.55□□□□□ -0.08
CPEB3Q8NE35 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.55□□□□□ -0.08
CPEB3Q8NE35 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.55□□□□□ -0.08
CPEB3Q8NE35 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.55□□□□□ -0.08
CPEB3Q8NE35 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.55□□□□□ -0.08
CPEB3Q8NE35 AL671883.3-201ENST00000603274 991 ntBASIC14.55□□□□□ -0.08
CPEB3Q8NE35 AL513190.1-201ENST00000621254 727 ntBASIC14.55□□□□□ -0.08
CPEB3Q8NE35 AC092865.6-201ENST00000642101 219 ntBASIC14.55□□□□□ -0.08
CPEB3Q8NE35 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
CPEB3Q8NE35 FLJ16779-201ENST00000612722 7638 ntBASIC14.55□□□□□ -0.08
CPEB3Q8NE35 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CPEB3Q8NE35 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CPEB3Q8NE35 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CPEB3Q8NE35 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CPEB3Q8NE35 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CPEB3Q8NE35 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CPEB3Q8NE35 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CPEB3Q8NE35 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CPEB3Q8NE35 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.55□□□□□ -0.08
CPEB3Q8NE35 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.55□□□□□ -0.08
CPEB3Q8NE35 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
CPEB3Q8NE35 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.55□□□□□ -0.08
CPEB3Q8NE35 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CPEB3Q8NE35 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.54□□□□□ -0.08
CPEB3Q8NE35 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.54□□□□□ -0.08
CPEB3Q8NE35 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CPEB3Q8NE35 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CPEB3Q8NE35 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPEB3Q8NE35 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPEB3Q8NE35 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.54□□□□□ -0.08
CPEB3Q8NE35 AC124067.4-201ENST00000519691 2379 ntBASIC14.54□□□□□ -0.08
CPEB3Q8NE35 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPEB3Q8NE35 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPEB3Q8NE35 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CPEB3Q8NE35 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CPEB3Q8NE35 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPEB3Q8NE35 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPEB3Q8NE35 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPEB3Q8NE35 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPEB3Q8NE35 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.54□□□□□ -0.08
CPEB3Q8NE35 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.54□□□□□ -0.08
CPEB3Q8NE35 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
CPEB3Q8NE35 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CPEB3Q8NE35 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CPEB3Q8NE35 POLD2P1-201ENST00000511220 997 ntBASIC14.54□□□□□ -0.08
CPEB3Q8NE35 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CPEB3Q8NE35 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.54□□□□□ -0.08
CPEB3Q8NE35 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CPEB3Q8NE35 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.54□□□□□ -0.08
CPEB3Q8NE35 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPEB3Q8NE35 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.54□□□□□ -0.08
CPEB3Q8NE35 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.54□□□□□ -0.08
CPEB3Q8NE35 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPEB3Q8NE35 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPEB3Q8NE35 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.54□□□□□ -0.08
CPEB3Q8NE35 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CPEB3Q8NE35 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms