Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
ZNF439Q8NDP4 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZNF439Q8NDP4 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ZNF439Q8NDP4 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZNF439Q8NDP4 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC13.83□□□□□ -0.2
ZNF439Q8NDP4 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZNF439Q8NDP4 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ZNF439Q8NDP4 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
ZNF439Q8NDP4 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC13.83□□□□□ -0.2
ZNF439Q8NDP4 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZNF439Q8NDP4 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC13.83□□□□□ -0.2
ZNF439Q8NDP4 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZNF439Q8NDP4 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
ZNF439Q8NDP4 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC13.83□□□□□ -0.2
ZNF439Q8NDP4 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC13.83□□□□□ -0.2
ZNF439Q8NDP4 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ZNF439Q8NDP4 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZNF439Q8NDP4 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ZNF439Q8NDP4 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
ZNF439Q8NDP4 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZNF439Q8NDP4 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZNF439Q8NDP4 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ZNF439Q8NDP4 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ZNF439Q8NDP4 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC13.82□□□□□ -0.2
ZNF439Q8NDP4 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC13.82□□□□□ -0.2
ZNF439Q8NDP4 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZNF439Q8NDP4 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZNF439Q8NDP4 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZNF439Q8NDP4 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ZNF439Q8NDP4 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC13.82□□□□□ -0.2
ZNF439Q8NDP4 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ZNF439Q8NDP4 AC079781.3-201ENST00000449110 356 ntBASIC13.82□□□□□ -0.2
ZNF439Q8NDP4 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC13.82□□□□□ -0.2
ZNF439Q8NDP4 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC13.82□□□□□ -0.2
ZNF439Q8NDP4 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC13.82□□□□□ -0.2
ZNF439Q8NDP4 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC13.82□□□□□ -0.2
ZNF439Q8NDP4 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
ZNF439Q8NDP4 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC13.82□□□□□ -0.2
ZNF439Q8NDP4 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC13.82□□□□□ -0.2
ZNF439Q8NDP4 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.82□□□□□ -0.2
ZNF439Q8NDP4 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC13.82□□□□□ -0.2
ZNF439Q8NDP4 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZNF439Q8NDP4 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC13.82□□□□□ -0.2
ZNF439Q8NDP4 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ZNF439Q8NDP4 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZNF439Q8NDP4 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ZNF439Q8NDP4 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZNF439Q8NDP4 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC13.82□□□□□ -0.2
ZNF439Q8NDP4 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ZNF439Q8NDP4 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
ZNF439Q8NDP4 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC13.81□□□□□ -0.2
ZNF439Q8NDP4 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF439Q8NDP4 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.81□□□□□ -0.2
ZNF439Q8NDP4 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF439Q8NDP4 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF439Q8NDP4 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
ZNF439Q8NDP4 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC13.81□□□□□ -0.2
ZNF439Q8NDP4 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC13.81□□□□□ -0.2
ZNF439Q8NDP4 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC13.81□□□□□ -0.2
ZNF439Q8NDP4 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF439Q8NDP4 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF439Q8NDP4 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC13.81□□□□□ -0.2
ZNF439Q8NDP4 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
ZNF439Q8NDP4 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC13.81□□□□□ -0.2
ZNF439Q8NDP4 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC13.81□□□□□ -0.2
ZNF439Q8NDP4 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC13.81□□□□□ -0.2
ZNF439Q8NDP4 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC13.81□□□□□ -0.2
ZNF439Q8NDP4 AL450487.1-201ENST00000426799 995 ntBASIC13.81□□□□□ -0.2
ZNF439Q8NDP4 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC13.81□□□□□ -0.2
ZNF439Q8NDP4 AF186996.4-201ENST00000467186 377 ntBASIC13.81□□□□□ -0.2
ZNF439Q8NDP4 AC107918.2-201ENST00000530817 355 ntBASIC13.81□□□□□ -0.2
ZNF439Q8NDP4 CIPC-205ENST00000555437 566 ntTSL 3 BASIC13.81□□□□□ -0.2
ZNF439Q8NDP4 RIN3-211ENST00000557762 517 ntTSL 3 BASIC13.81□□□□□ -0.2
ZNF439Q8NDP4 AC105339.3-201ENST00000560043 636 ntBASIC13.81□□□□□ -0.2
ZNF439Q8NDP4 AC012640.2-201ENST00000561606 901 ntBASIC13.81□□□□□ -0.2
ZNF439Q8NDP4 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF439Q8NDP4 RN7SL510P-201ENST00000581311 263 ntBASIC13.81□□□□□ -0.2
ZNF439Q8NDP4 MIR4492-201ENST00000581627 80 ntBASIC13.81□□□□□ -0.2
ZNF439Q8NDP4 MPDU1-223ENST00000582151 728 ntBASIC13.81□□□□□ -0.2
ZNF439Q8NDP4 AC008667.4-201ENST00000607370 168 ntBASIC13.81□□□□□ -0.2
ZNF439Q8NDP4 IRF5-214ENST00000613821 595 ntTSL 5 BASIC13.81□□□□□ -0.2
ZNF439Q8NDP4 GGTLC5P-201ENST00000617623 998 ntBASIC13.81□□□□□ -0.2
ZNF439Q8NDP4 AC148477.8-201ENST00000624298 468 ntBASIC13.81□□□□□ -0.2
ZNF439Q8NDP4 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC13.81□□□□□ -0.2
ZNF439Q8NDP4 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF439Q8NDP4 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF439Q8NDP4 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF439Q8NDP4 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC13.81□□□□□ -0.2
ZNF439Q8NDP4 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
ZNF439Q8NDP4 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC13.81□□□□□ -0.2
ZNF439Q8NDP4 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF439Q8NDP4 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF439Q8NDP4 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF439Q8NDP4 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZNF439Q8NDP4 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC13.81□□□□□ -0.2
ZNF439Q8NDP4 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC13.81□□□□□ -0.2
ZNF439Q8NDP4 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC13.81□□□□□ -0.2
ZNF439Q8NDP4 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
ZNF439Q8NDP4 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
ZNF439Q8NDP4 AC006538.1-201ENST00000567905 1585 ntBASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms