Protein–RNA interactions for Protein: Q8N4Z0

RAB42, Putative Ras-related protein Rab-42, humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB42Q8N4Z0 AL671883.3-201ENST00000603274 991 ntBASIC16.18■□□□□ 0.18
RAB42Q8N4Z0 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB42Q8N4Z0 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB42Q8N4Z0 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.18■□□□□ 0.18
RAB42Q8N4Z0 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB42Q8N4Z0 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
RAB42Q8N4Z0 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB42Q8N4Z0 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB42Q8N4Z0 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB42Q8N4Z0 AC078925.2-201ENST00000624013 1973 ntBASIC16.18■□□□□ 0.18
RAB42Q8N4Z0 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
RAB42Q8N4Z0 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB42Q8N4Z0 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB42Q8N4Z0 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.18■□□□□ 0.18
RAB42Q8N4Z0 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB42Q8N4Z0 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.18■□□□□ 0.18
RAB42Q8N4Z0 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RAB42Q8N4Z0 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB42Q8N4Z0 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RAB42Q8N4Z0 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RAB42Q8N4Z0 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB42Q8N4Z0 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.17■□□□□ 0.18
RAB42Q8N4Z0 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
RAB42Q8N4Z0 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.17■□□□□ 0.18
RAB42Q8N4Z0 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB42Q8N4Z0 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB42Q8N4Z0 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB42Q8N4Z0 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB42Q8N4Z0 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB42Q8N4Z0 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB42Q8N4Z0 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB42Q8N4Z0 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAB42Q8N4Z0 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.17■□□□□ 0.18
RAB42Q8N4Z0 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
RAB42Q8N4Z0 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.17■□□□□ 0.18
RAB42Q8N4Z0 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB42Q8N4Z0 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB42Q8N4Z0 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB42Q8N4Z0 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.17■□□□□ 0.18
RAB42Q8N4Z0 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAB42Q8N4Z0 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.17■□□□□ 0.18
RAB42Q8N4Z0 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.17■□□□□ 0.18
RAB42Q8N4Z0 ACTG1P14-201ENST00000446382 1122 ntBASIC16.17■□□□□ 0.18
RAB42Q8N4Z0 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.17■□□□□ 0.18
RAB42Q8N4Z0 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RAB42Q8N4Z0 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.17■□□□□ 0.18
RAB42Q8N4Z0 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.17■□□□□ 0.18
RAB42Q8N4Z0 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
RAB42Q8N4Z0 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.17■□□□□ 0.18
RAB42Q8N4Z0 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB42Q8N4Z0 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB42Q8N4Z0 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB42Q8N4Z0 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB42Q8N4Z0 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB42Q8N4Z0 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.17■□□□□ 0.18
RAB42Q8N4Z0 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB42Q8N4Z0 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB42Q8N4Z0 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB42Q8N4Z0 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB42Q8N4Z0 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.17■□□□□ 0.18
RAB42Q8N4Z0 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAB42Q8N4Z0 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
RAB42Q8N4Z0 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB42Q8N4Z0 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.16■□□□□ 0.18
RAB42Q8N4Z0 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB42Q8N4Z0 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB42Q8N4Z0 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB42Q8N4Z0 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB42Q8N4Z0 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
RAB42Q8N4Z0 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
RAB42Q8N4Z0 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
RAB42Q8N4Z0 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAB42Q8N4Z0 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB42Q8N4Z0 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.16■□□□□ 0.18
RAB42Q8N4Z0 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB42Q8N4Z0 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAB42Q8N4Z0 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB42Q8N4Z0 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.16■□□□□ 0.18
RAB42Q8N4Z0 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.16■□□□□ 0.18
RAB42Q8N4Z0 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAB42Q8N4Z0 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAB42Q8N4Z0 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.16■□□□□ 0.18
RAB42Q8N4Z0 C20orf181-201ENST00000623918 480 ntBASIC16.16■□□□□ 0.18
RAB42Q8N4Z0 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB42Q8N4Z0 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB42Q8N4Z0 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB42Q8N4Z0 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB42Q8N4Z0 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAB42Q8N4Z0 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB42Q8N4Z0 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAB42Q8N4Z0 HLA-A-202ENST00000376806 1854 ntBASIC16.16■□□□□ 0.18
RAB42Q8N4Z0 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.16■□□□□ 0.18
RAB42Q8N4Z0 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAB42Q8N4Z0 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAB42Q8N4Z0 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.16■□□□□ 0.18
RAB42Q8N4Z0 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB42Q8N4Z0 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.15■□□□□ 0.18
RAB42Q8N4Z0 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAB42Q8N4Z0 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAB42Q8N4Z0 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms