Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 AL031731.1-201ENST00000642131 2094 ntBASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 AC005332.1-201ENST00000577698 1310 ntBASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 TOB2P1-201ENST00000469761 992 ntBASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 AC104819.1-201ENST00000504587 486 ntBASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 PTK2-216ENST00000519881 863 ntTSL 3 BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 AL139424.1-201ENST00000607572 797 ntBASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 PCGF3-213ENST00000620529 1899 ntBASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
LINC01561Q8N1V8 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 PC-214ENST00000628663 1470 ntTSL 5 BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 GPAA1P2-202ENST00000606848 1787 ntBASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 AL031133.1-201ENST00000406807 723 ntBASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 AC211429.1-201ENST00000415277 523 ntBASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 AC012615.1-201ENST00000565797 1299 ntBASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 MIR5100-201ENST00000579544 119 ntBASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 IL11-204ENST00000590625 1028 ntTSL 2 BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 AC010654.1-201ENST00000615722 808 ntBASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 AC116407.4-201ENST00000623319 1061 ntBASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 AL139288.1-201ENST00000623748 933 ntBASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 CCNC-219ENST00000627680 896 ntTSL 5 BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
LINC01561Q8N1V8 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms