Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT78Q8N1N4 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
KRT78Q8N1N4 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KRT78Q8N1N4 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT78Q8N1N4 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
KRT78Q8N1N4 IGLL3P-201ENST00000412472 434 ntBASIC16.06■□□□□ 0.16
KRT78Q8N1N4 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
KRT78Q8N1N4 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.06■□□□□ 0.16
KRT78Q8N1N4 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT78Q8N1N4 AC034105.1-201ENST00000563488 319 ntBASIC16.06■□□□□ 0.16
KRT78Q8N1N4 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
KRT78Q8N1N4 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.06■□□□□ 0.16
KRT78Q8N1N4 AC023141.13-201ENST00000604991 943 ntBASIC16.06■□□□□ 0.16
KRT78Q8N1N4 AC120114.3-201ENST00000611923 658 ntBASIC16.06■□□□□ 0.16
KRT78Q8N1N4 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.06■□□□□ 0.16
KRT78Q8N1N4 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC16.06■□□□□ 0.16
KRT78Q8N1N4 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
KRT78Q8N1N4 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT78Q8N1N4 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.06■□□□□ 0.16
KRT78Q8N1N4 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.06■□□□□ 0.16
KRT78Q8N1N4 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
KRT78Q8N1N4 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT78Q8N1N4 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.06■□□□□ 0.16
KRT78Q8N1N4 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.06■□□□□ 0.16
KRT78Q8N1N4 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
KRT78Q8N1N4 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KRT78Q8N1N4 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KRT78Q8N1N4 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
KRT78Q8N1N4 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
KRT78Q8N1N4 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT78Q8N1N4 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT78Q8N1N4 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT78Q8N1N4 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.05■□□□□ 0.16
KRT78Q8N1N4 AL512652.2-201ENST00000625156 1716 ntBASIC16.05■□□□□ 0.16
KRT78Q8N1N4 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT78Q8N1N4 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT78Q8N1N4 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT78Q8N1N4 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.05■□□□□ 0.16
KRT78Q8N1N4 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
KRT78Q8N1N4 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
KRT78Q8N1N4 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT78Q8N1N4 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT78Q8N1N4 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.05■□□□□ 0.16
KRT78Q8N1N4 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT78Q8N1N4 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.05■□□□□ 0.16
KRT78Q8N1N4 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.05■□□□□ 0.16
KRT78Q8N1N4 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.05■□□□□ 0.16
KRT78Q8N1N4 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.05■□□□□ 0.16
KRT78Q8N1N4 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
KRT78Q8N1N4 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.05■□□□□ 0.16
KRT78Q8N1N4 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT78Q8N1N4 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.05■□□□□ 0.16
KRT78Q8N1N4 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.05■□□□□ 0.16
KRT78Q8N1N4 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.05■□□□□ 0.16
KRT78Q8N1N4 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.05■□□□□ 0.16
KRT78Q8N1N4 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT78Q8N1N4 AC064836.3-201ENST00000607928 673 ntBASIC16.05■□□□□ 0.16
KRT78Q8N1N4 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.05■□□□□ 0.16
KRT78Q8N1N4 AC010507.1-201ENST00000633895 436 ntBASIC16.05■□□□□ 0.16
KRT78Q8N1N4 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.05■□□□□ 0.16
KRT78Q8N1N4 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT78Q8N1N4 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KRT78Q8N1N4 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT78Q8N1N4 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT78Q8N1N4 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT78Q8N1N4 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.05■□□□□ 0.16
KRT78Q8N1N4 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KRT78Q8N1N4 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
KRT78Q8N1N4 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.04■□□□□ 0.16
KRT78Q8N1N4 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KRT78Q8N1N4 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.04■□□□□ 0.16
KRT78Q8N1N4 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KRT78Q8N1N4 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.04■□□□□ 0.16
KRT78Q8N1N4 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT78Q8N1N4 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KRT78Q8N1N4 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
KRT78Q8N1N4 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
KRT78Q8N1N4 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT78Q8N1N4 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.04■□□□□ 0.16
KRT78Q8N1N4 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.04■□□□□ 0.16
KRT78Q8N1N4 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.04■□□□□ 0.16
KRT78Q8N1N4 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT78Q8N1N4 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.04■□□□□ 0.16
KRT78Q8N1N4 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT78Q8N1N4 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KRT78Q8N1N4 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.04■□□□□ 0.16
KRT78Q8N1N4 RHOQP3-201ENST00000437982 621 ntBASIC16.04■□□□□ 0.16
KRT78Q8N1N4 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.04■□□□□ 0.16
KRT78Q8N1N4 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.04■□□□□ 0.16
KRT78Q8N1N4 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.04■□□□□ 0.16
KRT78Q8N1N4 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.04■□□□□ 0.16
KRT78Q8N1N4 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
KRT78Q8N1N4 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.04■□□□□ 0.16
KRT78Q8N1N4 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.04■□□□□ 0.16
KRT78Q8N1N4 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KRT78Q8N1N4 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT78Q8N1N4 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KRT78Q8N1N4 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.04■□□□□ 0.16
KRT78Q8N1N4 AC063926.3-201ENST00000624734 5658 ntBASIC16.04■□□□□ 0.16
KRT78Q8N1N4 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms