Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
VPS52Q8N1B4 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
VPS52Q8N1B4 AL353732.1-201ENST00000569618 1459 ntBASIC18.03■□□□□ 0.48
VPS52Q8N1B4 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
VPS52Q8N1B4 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.03■□□□□ 0.48
VPS52Q8N1B4 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
VPS52Q8N1B4 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VPS52Q8N1B4 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
VPS52Q8N1B4 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
VPS52Q8N1B4 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.03■□□□□ 0.48
VPS52Q8N1B4 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VPS52Q8N1B4 BASP1P1-201ENST00000430708 665 ntBASIC18.03■□□□□ 0.48
VPS52Q8N1B4 KLF2P3-201ENST00000451977 1087 ntBASIC18.03■□□□□ 0.48
VPS52Q8N1B4 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VPS52Q8N1B4 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.03■□□□□ 0.48
VPS52Q8N1B4 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.03■□□□□ 0.48
VPS52Q8N1B4 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
VPS52Q8N1B4 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.03■□□□□ 0.48
VPS52Q8N1B4 LINC01225-203ENST00000563550 1244 ntBASIC18.03■□□□□ 0.48
VPS52Q8N1B4 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
VPS52Q8N1B4 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VPS52Q8N1B4 AC239800.4-201ENST00000603712 296 ntBASIC18.03■□□□□ 0.48
VPS52Q8N1B4 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VPS52Q8N1B4 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.03■□□□□ 0.48
VPS52Q8N1B4 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VPS52Q8N1B4 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.03■□□□□ 0.48
VPS52Q8N1B4 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VPS52Q8N1B4 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VPS52Q8N1B4 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
VPS52Q8N1B4 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC18.03■□□□□ 0.48
VPS52Q8N1B4 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
VPS52Q8N1B4 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
VPS52Q8N1B4 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC18.03■□□□□ 0.48
VPS52Q8N1B4 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
VPS52Q8N1B4 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.02■□□□□ 0.48
VPS52Q8N1B4 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
VPS52Q8N1B4 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
VPS52Q8N1B4 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.02■□□□□ 0.48
VPS52Q8N1B4 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
VPS52Q8N1B4 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
VPS52Q8N1B4 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
VPS52Q8N1B4 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
VPS52Q8N1B4 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.02■□□□□ 0.48
VPS52Q8N1B4 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.02■□□□□ 0.48
VPS52Q8N1B4 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.02■□□□□ 0.48
VPS52Q8N1B4 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.02■□□□□ 0.48
VPS52Q8N1B4 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.02■□□□□ 0.48
VPS52Q8N1B4 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
VPS52Q8N1B4 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
VPS52Q8N1B4 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
VPS52Q8N1B4 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
VPS52Q8N1B4 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
VPS52Q8N1B4 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
VPS52Q8N1B4 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
VPS52Q8N1B4 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.02■□□□□ 0.48
VPS52Q8N1B4 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.02■□□□□ 0.48
VPS52Q8N1B4 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
VPS52Q8N1B4 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.02■□□□□ 0.48
VPS52Q8N1B4 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC18.02■□□□□ 0.48
VPS52Q8N1B4 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
VPS52Q8N1B4 AC109635.5-201ENST00000533593 962 ntBASIC18.02■□□□□ 0.48
VPS52Q8N1B4 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.02■□□□□ 0.48
VPS52Q8N1B4 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
VPS52Q8N1B4 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.02■□□□□ 0.48
VPS52Q8N1B4 KRT8P23-201ENST00000560090 1207 ntBASIC18.02■□□□□ 0.48
VPS52Q8N1B4 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.02■□□□□ 0.48
VPS52Q8N1B4 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.02■□□□□ 0.48
VPS52Q8N1B4 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
VPS52Q8N1B4 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
VPS52Q8N1B4 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
VPS52Q8N1B4 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.02■□□□□ 0.47
VPS52Q8N1B4 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
VPS52Q8N1B4 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
VPS52Q8N1B4 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
VPS52Q8N1B4 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
VPS52Q8N1B4 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
VPS52Q8N1B4 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.02■□□□□ 0.47
VPS52Q8N1B4 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
VPS52Q8N1B4 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
VPS52Q8N1B4 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
VPS52Q8N1B4 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
VPS52Q8N1B4 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
VPS52Q8N1B4 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
VPS52Q8N1B4 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
VPS52Q8N1B4 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VPS52Q8N1B4 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
VPS52Q8N1B4 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VPS52Q8N1B4 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC18.01■□□□□ 0.47
VPS52Q8N1B4 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VPS52Q8N1B4 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
VPS52Q8N1B4 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
VPS52Q8N1B4 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
VPS52Q8N1B4 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.01■□□□□ 0.47
VPS52Q8N1B4 AC107890.1-201ENST00000422478 521 ntBASIC18.01■□□□□ 0.47
VPS52Q8N1B4 AC125807.1-201ENST00000483097 614 ntBASIC18.01■□□□□ 0.47
VPS52Q8N1B4 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
VPS52Q8N1B4 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
VPS52Q8N1B4 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
VPS52Q8N1B4 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC18.01■□□□□ 0.47
VPS52Q8N1B4 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms