Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
CHPFQ8IZ52 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.3
CHPFQ8IZ52 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
CHPFQ8IZ52 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
CHPFQ8IZ52 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CHPFQ8IZ52 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CHPFQ8IZ52 CROCCP1-201ENST00000426910 5675 ntBASIC16.89■□□□□ 0.29
CHPFQ8IZ52 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.89■□□□□ 0.29
CHPFQ8IZ52 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CHPFQ8IZ52 LINC00895-201ENST00000629028 1637 ntBASIC16.89■□□□□ 0.29
CHPFQ8IZ52 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHPFQ8IZ52 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHPFQ8IZ52 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHPFQ8IZ52 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHPFQ8IZ52 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHPFQ8IZ52 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHPFQ8IZ52 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHPFQ8IZ52 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CHPFQ8IZ52 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHPFQ8IZ52 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHPFQ8IZ52 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHPFQ8IZ52 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.89■□□□□ 0.29
CHPFQ8IZ52 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.89■□□□□ 0.29
CHPFQ8IZ52 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.89■□□□□ 0.29
CHPFQ8IZ52 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHPFQ8IZ52 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.89■□□□□ 0.29
CHPFQ8IZ52 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHPFQ8IZ52 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.89■□□□□ 0.29
CHPFQ8IZ52 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.89■□□□□ 0.29
CHPFQ8IZ52 AC105233.2-201ENST00000523697 349 ntBASIC16.89■□□□□ 0.29
CHPFQ8IZ52 AF228730.5-201ENST00000530288 346 ntBASIC16.89■□□□□ 0.29
CHPFQ8IZ52 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.89■□□□□ 0.29
CHPFQ8IZ52 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.89■□□□□ 0.29
CHPFQ8IZ52 AL158211.3-201ENST00000607385 239 ntBASIC16.89■□□□□ 0.29
CHPFQ8IZ52 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.89■□□□□ 0.29
CHPFQ8IZ52 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHPFQ8IZ52 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CHPFQ8IZ52 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHPFQ8IZ52 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.89■□□□□ 0.29
CHPFQ8IZ52 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
CHPFQ8IZ52 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHPFQ8IZ52 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CHPFQ8IZ52 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC16.89■□□□□ 0.29
CHPFQ8IZ52 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHPFQ8IZ52 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.89■□□□□ 0.29
CHPFQ8IZ52 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CHPFQ8IZ52 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHPFQ8IZ52 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CHPFQ8IZ52 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CHPFQ8IZ52 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHPFQ8IZ52 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHPFQ8IZ52 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CHPFQ8IZ52 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHPFQ8IZ52 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHPFQ8IZ52 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHPFQ8IZ52 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHPFQ8IZ52 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHPFQ8IZ52 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHPFQ8IZ52 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.88■□□□□ 0.29
CHPFQ8IZ52 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.88■□□□□ 0.29
CHPFQ8IZ52 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHPFQ8IZ52 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CHPFQ8IZ52 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHPFQ8IZ52 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.88■□□□□ 0.29
CHPFQ8IZ52 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHPFQ8IZ52 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CHPFQ8IZ52 AC106820.2-201ENST00000563775 3264 ntBASIC16.88■□□□□ 0.29
CHPFQ8IZ52 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CHPFQ8IZ52 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.88■□□□□ 0.29
CHPFQ8IZ52 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC16.88■□□□□ 0.29
CHPFQ8IZ52 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHPFQ8IZ52 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.88■□□□□ 0.29
CHPFQ8IZ52 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHPFQ8IZ52 AC124947.2-201ENST00000547118 1133 ntBASIC16.88■□□□□ 0.29
CHPFQ8IZ52 MIR4453-201ENST00000584019 89 ntBASIC16.88■□□□□ 0.29
CHPFQ8IZ52 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHPFQ8IZ52 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHPFQ8IZ52 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHPFQ8IZ52 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHPFQ8IZ52 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.88■□□□□ 0.29
CHPFQ8IZ52 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHPFQ8IZ52 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHPFQ8IZ52 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHPFQ8IZ52 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CHPFQ8IZ52 TNRC18P3-201ENST00000441896 2691 ntBASIC16.88■□□□□ 0.29
CHPFQ8IZ52 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHPFQ8IZ52 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHPFQ8IZ52 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHPFQ8IZ52 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHPFQ8IZ52 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHPFQ8IZ52 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHPFQ8IZ52 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHPFQ8IZ52 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CHPFQ8IZ52 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CHPFQ8IZ52 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.87■□□□□ 0.29
CHPFQ8IZ52 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHPFQ8IZ52 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CHPFQ8IZ52 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
CHPFQ8IZ52 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
CHPFQ8IZ52 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms