Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.46■□□□□ 0.39
SCUBE3Q8IX30 AC099522.2-201ENST00000607001 744 ntBASIC17.46■□□□□ 0.39
SCUBE3Q8IX30 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCUBE3Q8IX30 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SCUBE3Q8IX30 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCUBE3Q8IX30 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCUBE3Q8IX30 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SCUBE3Q8IX30 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCUBE3Q8IX30 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCUBE3Q8IX30 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
SCUBE3Q8IX30 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SCUBE3Q8IX30 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SCUBE3Q8IX30 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.38
SCUBE3Q8IX30 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SCUBE3Q8IX30 GGT3P-204ENST00000453783 1664 ntBASIC17.45■□□□□ 0.38
SCUBE3Q8IX30 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.45■□□□□ 0.38
SCUBE3Q8IX30 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCUBE3Q8IX30 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SCUBE3Q8IX30 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SCUBE3Q8IX30 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC17.45■□□□□ 0.38
SCUBE3Q8IX30 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCUBE3Q8IX30 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SCUBE3Q8IX30 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCUBE3Q8IX30 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCUBE3Q8IX30 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCUBE3Q8IX30 RPSAP43-201ENST00000402237 625 ntBASIC17.45■□□□□ 0.38
SCUBE3Q8IX30 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SCUBE3Q8IX30 GPX1P2-201ENST00000429271 606 ntBASIC17.45■□□□□ 0.38
SCUBE3Q8IX30 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SCUBE3Q8IX30 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.45■□□□□ 0.38
SCUBE3Q8IX30 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
SCUBE3Q8IX30 MIR3687-2-201ENST00000577708 61 ntBASIC17.45■□□□□ 0.38
SCUBE3Q8IX30 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.45■□□□□ 0.38
SCUBE3Q8IX30 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
SCUBE3Q8IX30 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.45■□□□□ 0.38
SCUBE3Q8IX30 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SCUBE3Q8IX30 MIR3687-1-201ENST00000614492 61 ntBASIC17.45■□□□□ 0.38
SCUBE3Q8IX30 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.45■□□□□ 0.38
SCUBE3Q8IX30 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.45■□□□□ 0.38
SCUBE3Q8IX30 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCUBE3Q8IX30 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
SCUBE3Q8IX30 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.45■□□□□ 0.38
SCUBE3Q8IX30 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCUBE3Q8IX30 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCUBE3Q8IX30 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCUBE3Q8IX30 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.45■□□□□ 0.38
SCUBE3Q8IX30 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SCUBE3Q8IX30 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.45■□□□□ 0.38
SCUBE3Q8IX30 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SCUBE3Q8IX30 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.45■□□□□ 0.38
SCUBE3Q8IX30 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SCUBE3Q8IX30 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.44■□□□□ 0.38
SCUBE3Q8IX30 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.44■□□□□ 0.38
SCUBE3Q8IX30 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.44■□□□□ 0.38
SCUBE3Q8IX30 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SCUBE3Q8IX30 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
SCUBE3Q8IX30 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
SCUBE3Q8IX30 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
SCUBE3Q8IX30 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCUBE3Q8IX30 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCUBE3Q8IX30 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.44■□□□□ 0.38
SCUBE3Q8IX30 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.44■□□□□ 0.38
SCUBE3Q8IX30 AL671277.1-201ENST00000429656 993 ntBASIC17.44■□□□□ 0.38
SCUBE3Q8IX30 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SCUBE3Q8IX30 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.44■□□□□ 0.38
SCUBE3Q8IX30 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.44■□□□□ 0.38
SCUBE3Q8IX30 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
SCUBE3Q8IX30 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.44■□□□□ 0.38
SCUBE3Q8IX30 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.44■□□□□ 0.38
SCUBE3Q8IX30 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCUBE3Q8IX30 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
SCUBE3Q8IX30 AL161645.1-201ENST00000622716 1255 ntBASIC17.44■□□□□ 0.38
SCUBE3Q8IX30 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SCUBE3Q8IX30 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.44■□□□□ 0.38
SCUBE3Q8IX30 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SCUBE3Q8IX30 AC016027.1-202ENST00000607927 1699 ntBASIC17.44■□□□□ 0.38
SCUBE3Q8IX30 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SCUBE3Q8IX30 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
SCUBE3Q8IX30 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
SCUBE3Q8IX30 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCUBE3Q8IX30 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.44■□□□□ 0.38
SCUBE3Q8IX30 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCUBE3Q8IX30 PCDH8P1-201ENST00000428983 2773 ntBASIC17.44■□□□□ 0.38
SCUBE3Q8IX30 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SCUBE3Q8IX30 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.44■□□□□ 0.38
SCUBE3Q8IX30 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.44■□□□□ 0.38
SCUBE3Q8IX30 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCUBE3Q8IX30 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.43■□□□□ 0.38
SCUBE3Q8IX30 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.43■□□□□ 0.38
SCUBE3Q8IX30 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SCUBE3Q8IX30 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SCUBE3Q8IX30 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCUBE3Q8IX30 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.43■□□□□ 0.38
SCUBE3Q8IX30 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.43■□□□□ 0.38
SCUBE3Q8IX30 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.43■□□□□ 0.38
SCUBE3Q8IX30 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCUBE3Q8IX30 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SCUBE3Q8IX30 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
SCUBE3Q8IX30 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SCUBE3Q8IX30 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms