Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00346Q8IVM7 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00346Q8IVM7 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00346Q8IVM7 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00346Q8IVM7 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.75□□□□□ -0.05
LINC00346Q8IVM7 GGT3P-204ENST00000453783 1664 ntBASIC14.75□□□□□ -0.05
LINC00346Q8IVM7 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.75□□□□□ -0.05
LINC00346Q8IVM7 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00346Q8IVM7 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00346Q8IVM7 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
LINC00346Q8IVM7 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC14.75□□□□□ -0.05
LINC00346Q8IVM7 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.75□□□□□ -0.05
LINC00346Q8IVM7 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC14.75□□□□□ -0.05
LINC00346Q8IVM7 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.75□□□□□ -0.05
LINC00346Q8IVM7 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.75□□□□□ -0.05
LINC00346Q8IVM7 AC079781.3-201ENST00000449110 356 ntBASIC14.75□□□□□ -0.05
LINC00346Q8IVM7 AF186996.4-201ENST00000467186 377 ntBASIC14.75□□□□□ -0.05
LINC00346Q8IVM7 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.75□□□□□ -0.05
LINC00346Q8IVM7 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.75□□□□□ -0.05
LINC00346Q8IVM7 MOK-208ENST00000519058 917 ntTSL 2 BASIC14.75□□□□□ -0.05
LINC00346Q8IVM7 AC012640.2-201ENST00000561606 901 ntBASIC14.75□□□□□ -0.05
LINC00346Q8IVM7 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.75□□□□□ -0.05
LINC00346Q8IVM7 AL356488.2-201ENST00000602755 427 ntBASIC14.75□□□□□ -0.05
LINC00346Q8IVM7 GGTLC5P-201ENST00000617623 998 ntBASIC14.75□□□□□ -0.05
LINC00346Q8IVM7 AC148477.8-201ENST00000624298 468 ntBASIC14.75□□□□□ -0.05
LINC00346Q8IVM7 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.75□□□□□ -0.05
LINC00346Q8IVM7 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00346Q8IVM7 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00346Q8IVM7 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.75□□□□□ -0.05
LINC00346Q8IVM7 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00346Q8IVM7 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00346Q8IVM7 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.75□□□□□ -0.05
LINC00346Q8IVM7 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00346Q8IVM7 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.75□□□□□ -0.05
LINC00346Q8IVM7 AL031731.1-201ENST00000642131 2094 ntBASIC14.75□□□□□ -0.05
LINC00346Q8IVM7 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00346Q8IVM7 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00346Q8IVM7 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.75□□□□□ -0.05
LINC00346Q8IVM7 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
LINC00346Q8IVM7 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
LINC00346Q8IVM7 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00346Q8IVM7 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
LINC00346Q8IVM7 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00346Q8IVM7 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.74□□□□□ -0.05
LINC00346Q8IVM7 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
LINC00346Q8IVM7 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00346Q8IVM7 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
LINC00346Q8IVM7 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.74□□□□□ -0.05
LINC00346Q8IVM7 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00346Q8IVM7 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00346Q8IVM7 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00346Q8IVM7 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.74□□□□□ -0.05
LINC00346Q8IVM7 FUK-207ENST00000571514 3054 ntTSL 2 BASIC14.74□□□□□ -0.05
LINC00346Q8IVM7 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.74□□□□□ -0.05
LINC00346Q8IVM7 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00346Q8IVM7 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.74□□□□□ -0.05
LINC00346Q8IVM7 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.74□□□□□ -0.05
LINC00346Q8IVM7 AC018712.1-201ENST00000455767 687 ntBASIC14.74□□□□□ -0.05
LINC00346Q8IVM7 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.74□□□□□ -0.05
LINC00346Q8IVM7 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.74□□□□□ -0.05
LINC00346Q8IVM7 AC105339.3-201ENST00000560043 636 ntBASIC14.74□□□□□ -0.05
LINC00346Q8IVM7 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.74□□□□□ -0.05
LINC00346Q8IVM7 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.74□□□□□ -0.05
LINC00346Q8IVM7 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.74□□□□□ -0.05
LINC00346Q8IVM7 CYP2A7P1-201ENST00000595391 815 ntBASIC14.74□□□□□ -0.05
LINC00346Q8IVM7 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00346Q8IVM7 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14.74□□□□□ -0.05
LINC00346Q8IVM7 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00346Q8IVM7 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00346Q8IVM7 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00346Q8IVM7 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.74□□□□□ -0.05
LINC00346Q8IVM7 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
LINC00346Q8IVM7 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00346Q8IVM7 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00346Q8IVM7 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
LINC00346Q8IVM7 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00346Q8IVM7 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.74□□□□□ -0.05
LINC00346Q8IVM7 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
LINC00346Q8IVM7 KRT8P39-201ENST00000396270 1433 ntBASIC14.74□□□□□ -0.05
LINC00346Q8IVM7 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LINC00346Q8IVM7 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.74□□□□□ -0.05
LINC00346Q8IVM7 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
LINC00346Q8IVM7 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00346Q8IVM7 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
LINC00346Q8IVM7 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
LINC00346Q8IVM7 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
LINC00346Q8IVM7 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.73□□□□□ -0.05
LINC00346Q8IVM7 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.73□□□□□ -0.05
LINC00346Q8IVM7 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00346Q8IVM7 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00346Q8IVM7 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.73□□□□□ -0.05
LINC00346Q8IVM7 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
LINC00346Q8IVM7 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00346Q8IVM7 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00346Q8IVM7 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00346Q8IVM7 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00346Q8IVM7 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00346Q8IVM7 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
LINC00346Q8IVM7 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LINC00346Q8IVM7 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms