Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NUDCD3Q8IVD9 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NUDCD3Q8IVD9 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
NUDCD3Q8IVD9 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.57■□□□□ 0.24
NUDCD3Q8IVD9 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NUDCD3Q8IVD9 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NUDCD3Q8IVD9 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.57■□□□□ 0.24
NUDCD3Q8IVD9 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NUDCD3Q8IVD9 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.57■□□□□ 0.24
NUDCD3Q8IVD9 RCN1P2-201ENST00000398357 915 ntBASIC16.57■□□□□ 0.24
NUDCD3Q8IVD9 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.57■□□□□ 0.24
NUDCD3Q8IVD9 BX276092.5-203ENST00000456199 560 ntBASIC16.57■□□□□ 0.24
NUDCD3Q8IVD9 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NUDCD3Q8IVD9 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.57■□□□□ 0.24
NUDCD3Q8IVD9 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.57■□□□□ 0.24
NUDCD3Q8IVD9 LINC01238-205ENST00000567549 1107 ntBASIC16.57■□□□□ 0.24
NUDCD3Q8IVD9 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.57■□□□□ 0.24
NUDCD3Q8IVD9 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NUDCD3Q8IVD9 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.57■□□□□ 0.24
NUDCD3Q8IVD9 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC16.57■□□□□ 0.24
NUDCD3Q8IVD9 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.57■□□□□ 0.24
NUDCD3Q8IVD9 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NUDCD3Q8IVD9 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NUDCD3Q8IVD9 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NUDCD3Q8IVD9 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
NUDCD3Q8IVD9 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NUDCD3Q8IVD9 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
NUDCD3Q8IVD9 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
NUDCD3Q8IVD9 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
NUDCD3Q8IVD9 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
NUDCD3Q8IVD9 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.57■□□□□ 0.24
NUDCD3Q8IVD9 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NUDCD3Q8IVD9 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NUDCD3Q8IVD9 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NUDCD3Q8IVD9 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NUDCD3Q8IVD9 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NUDCD3Q8IVD9 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NUDCD3Q8IVD9 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NUDCD3Q8IVD9 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NUDCD3Q8IVD9 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.56■□□□□ 0.24
NUDCD3Q8IVD9 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.56■□□□□ 0.24
NUDCD3Q8IVD9 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
NUDCD3Q8IVD9 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NUDCD3Q8IVD9 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
NUDCD3Q8IVD9 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NUDCD3Q8IVD9 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
NUDCD3Q8IVD9 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
NUDCD3Q8IVD9 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
NUDCD3Q8IVD9 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NUDCD3Q8IVD9 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NUDCD3Q8IVD9 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.56■□□□□ 0.24
NUDCD3Q8IVD9 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NUDCD3Q8IVD9 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.56■□□□□ 0.24
NUDCD3Q8IVD9 AC233702.3-201ENST00000578656 1387 ntBASIC16.56■□□□□ 0.24
NUDCD3Q8IVD9 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NUDCD3Q8IVD9 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NUDCD3Q8IVD9 AC126177.1-201ENST00000547829 2218 ntBASIC16.56■□□□□ 0.24
NUDCD3Q8IVD9 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NUDCD3Q8IVD9 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NUDCD3Q8IVD9 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NUDCD3Q8IVD9 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NUDCD3Q8IVD9 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NUDCD3Q8IVD9 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NUDCD3Q8IVD9 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC16.56■□□□□ 0.24
NUDCD3Q8IVD9 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.56■□□□□ 0.24
NUDCD3Q8IVD9 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.56■□□□□ 0.24
NUDCD3Q8IVD9 AC096582.2-201ENST00000510860 516 ntBASIC16.56■□□□□ 0.24
NUDCD3Q8IVD9 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
NUDCD3Q8IVD9 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.56■□□□□ 0.24
NUDCD3Q8IVD9 AL121672.3-201ENST00000608644 468 ntBASIC16.56■□□□□ 0.24
NUDCD3Q8IVD9 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NUDCD3Q8IVD9 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
NUDCD3Q8IVD9 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.56■□□□□ 0.24
NUDCD3Q8IVD9 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.56■□□□□ 0.24
NUDCD3Q8IVD9 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.56■□□□□ 0.24
NUDCD3Q8IVD9 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
NUDCD3Q8IVD9 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NUDCD3Q8IVD9 SNX33P1-201ENST00000592116 1762 ntBASIC16.56■□□□□ 0.24
NUDCD3Q8IVD9 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NUDCD3Q8IVD9 AL512652.2-201ENST00000625156 1716 ntBASIC16.56■□□□□ 0.24
NUDCD3Q8IVD9 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NUDCD3Q8IVD9 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NUDCD3Q8IVD9 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NUDCD3Q8IVD9 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NUDCD3Q8IVD9 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
NUDCD3Q8IVD9 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
NUDCD3Q8IVD9 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NUDCD3Q8IVD9 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NUDCD3Q8IVD9 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.55■□□□□ 0.24
NUDCD3Q8IVD9 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NUDCD3Q8IVD9 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NUDCD3Q8IVD9 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NUDCD3Q8IVD9 SIGLEC16-201ENST00000599858 1437 ntBASIC16.55■□□□□ 0.24
NUDCD3Q8IVD9 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NUDCD3Q8IVD9 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NUDCD3Q8IVD9 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NUDCD3Q8IVD9 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NUDCD3Q8IVD9 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.55■□□□□ 0.24
NUDCD3Q8IVD9 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NUDCD3Q8IVD9 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms