Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC14.63□□□□□ -0.07
LYSMD2Q8IV50 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC14.63□□□□□ -0.07
LYSMD2Q8IV50 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC14.63□□□□□ -0.07
LYSMD2Q8IV50 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD2Q8IV50 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC14.63□□□□□ -0.07
LYSMD2Q8IV50 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC14.63□□□□□ -0.07
LYSMD2Q8IV50 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC14.63□□□□□ -0.07
LYSMD2Q8IV50 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
LYSMD2Q8IV50 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC14.63□□□□□ -0.07
LYSMD2Q8IV50 ITM2C-210ENST00000620962 501 ntBASIC14.63□□□□□ -0.07
LYSMD2Q8IV50 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD2Q8IV50 AC015656.1-201ENST00000624209 3578 ntBASIC14.63□□□□□ -0.07
LYSMD2Q8IV50 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
LYSMD2Q8IV50 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD2Q8IV50 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
LYSMD2Q8IV50 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC14.63□□□□□ -0.07
LYSMD2Q8IV50 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.63□□□□□ -0.07
LYSMD2Q8IV50 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC14.63□□□□□ -0.07
LYSMD2Q8IV50 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD2Q8IV50 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.63□□□□□ -0.07
LYSMD2Q8IV50 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD2Q8IV50 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD2Q8IV50 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD2Q8IV50 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.63□□□□□ -0.07
LYSMD2Q8IV50 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD2Q8IV50 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD2Q8IV50 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.63□□□□□ -0.07
LYSMD2Q8IV50 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD2Q8IV50 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.63□□□□□ -0.07
LYSMD2Q8IV50 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD2Q8IV50 AC041040.2-201ENST00000622926 2899 ntBASIC14.63□□□□□ -0.07
LYSMD2Q8IV50 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD2Q8IV50 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD2Q8IV50 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.63□□□□□ -0.07
LYSMD2Q8IV50 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.63□□□□□ -0.07
LYSMD2Q8IV50 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
LYSMD2Q8IV50 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD2Q8IV50 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.62□□□□□ -0.07
LYSMD2Q8IV50 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD2Q8IV50 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD2Q8IV50 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD2Q8IV50 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.62□□□□□ -0.07
LYSMD2Q8IV50 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.62□□□□□ -0.07
LYSMD2Q8IV50 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD2Q8IV50 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
LYSMD2Q8IV50 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC14.62□□□□□ -0.07
LYSMD2Q8IV50 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
LYSMD2Q8IV50 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.62□□□□□ -0.07
LYSMD2Q8IV50 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD2Q8IV50 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD2Q8IV50 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD2Q8IV50 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD2Q8IV50 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD2Q8IV50 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD2Q8IV50 MYCLP1-201ENST00000372451 1075 ntBASIC14.62□□□□□ -0.07
LYSMD2Q8IV50 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD2Q8IV50 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD2Q8IV50 MIR1238-201ENST00000408483 83 ntBASIC14.62□□□□□ -0.07
LYSMD2Q8IV50 TSPY12P-201ENST00000421279 868 ntBASIC14.62□□□□□ -0.07
LYSMD2Q8IV50 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC14.62□□□□□ -0.07
LYSMD2Q8IV50 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD2Q8IV50 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC14.62□□□□□ -0.07
LYSMD2Q8IV50 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC14.62□□□□□ -0.07
LYSMD2Q8IV50 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC14.62□□□□□ -0.07
LYSMD2Q8IV50 GXYLT1P4-201ENST00000613576 1192 ntBASIC14.62□□□□□ -0.07
LYSMD2Q8IV50 AC079781.5-202ENST00000641784 3743 ntBASIC14.62□□□□□ -0.07
LYSMD2Q8IV50 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD2Q8IV50 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD2Q8IV50 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.62□□□□□ -0.07
LYSMD2Q8IV50 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD2Q8IV50 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD2Q8IV50 LINC00895-201ENST00000629028 1637 ntBASIC14.62□□□□□ -0.07
LYSMD2Q8IV50 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD2Q8IV50 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD2Q8IV50 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD2Q8IV50 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD2Q8IV50 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
LYSMD2Q8IV50 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD2Q8IV50 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD2Q8IV50 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
LYSMD2Q8IV50 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
LYSMD2Q8IV50 GGT3P-204ENST00000453783 1664 ntBASIC14.61□□□□□ -0.07
LYSMD2Q8IV50 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LYSMD2Q8IV50 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
LYSMD2Q8IV50 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.61□□□□□ -0.07
LYSMD2Q8IV50 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LYSMD2Q8IV50 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
LYSMD2Q8IV50 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
LYSMD2Q8IV50 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LYSMD2Q8IV50 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
LYSMD2Q8IV50 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LYSMD2Q8IV50 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
LYSMD2Q8IV50 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LYSMD2Q8IV50 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.61□□□□□ -0.07
LYSMD2Q8IV50 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
LYSMD2Q8IV50 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.61□□□□□ -0.07
LYSMD2Q8IV50 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
LYSMD2Q8IV50 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
LYSMD2Q8IV50 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
LYSMD2Q8IV50 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms