Protein–RNA interactions for Protein: Q86YD7

FAM90A1, Protein FAM90A1, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A1Q86YD7 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
FAM90A1Q86YD7 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
FAM90A1Q86YD7 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
FAM90A1Q86YD7 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
FAM90A1Q86YD7 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
FAM90A1Q86YD7 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
FAM90A1Q86YD7 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
FAM90A1Q86YD7 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
FAM90A1Q86YD7 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
FAM90A1Q86YD7 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
FAM90A1Q86YD7 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
FAM90A1Q86YD7 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
FAM90A1Q86YD7 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 PCDHB19P-201ENST00000570871 2371 ntBASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 NEK7-201ENST00000367383 586 ntTSL 2 BASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 RPP21-221ENST00000428040 594 ntTSL 2 BASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 ALG1L5P-201ENST00000482043 771 ntBASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 AC092865.5-201ENST00000545435 363 ntBASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
FAM90A1Q86YD7 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
FAM90A1Q86YD7 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC13.93□□□□□ -0.18
FAM90A1Q86YD7 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FAM90A1Q86YD7 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
FAM90A1Q86YD7 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FAM90A1Q86YD7 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FAM90A1Q86YD7 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
FAM90A1Q86YD7 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC13.93□□□□□ -0.18
FAM90A1Q86YD7 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
FAM90A1Q86YD7 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
FAM90A1Q86YD7 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FAM90A1Q86YD7 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.93□□□□□ -0.18
FAM90A1Q86YD7 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
FAM90A1Q86YD7 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
FAM90A1Q86YD7 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC13.93□□□□□ -0.18
FAM90A1Q86YD7 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
FAM90A1Q86YD7 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
FAM90A1Q86YD7 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
FAM90A1Q86YD7 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.93□□□□□ -0.18
FAM90A1Q86YD7 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
FAM90A1Q86YD7 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.93□□□□□ -0.18
FAM90A1Q86YD7 AC092474.2-201ENST00000424288 719 ntBASIC13.93□□□□□ -0.18
FAM90A1Q86YD7 GPX1P2-201ENST00000429271 606 ntBASIC13.93□□□□□ -0.18
FAM90A1Q86YD7 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13.93□□□□□ -0.18
FAM90A1Q86YD7 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC13.93□□□□□ -0.18
FAM90A1Q86YD7 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
FAM90A1Q86YD7 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
FAM90A1Q86YD7 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
FAM90A1Q86YD7 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
FAM90A1Q86YD7 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
FAM90A1Q86YD7 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms