Protein–RNA interactions for Protein: Q6ZMN8

CCNI2, Cyclin-I2, humanhuman

Predicted RBP Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNI2Q6ZMN8 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNI2Q6ZMN8 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNI2Q6ZMN8 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CCNI2Q6ZMN8 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC17.68■□□□□ 0.42
CCNI2Q6ZMN8 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCNI2Q6ZMN8 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.68■□□□□ 0.42
CCNI2Q6ZMN8 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCNI2Q6ZMN8 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCNI2Q6ZMN8 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.68■□□□□ 0.42
CCNI2Q6ZMN8 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.68■□□□□ 0.42
CCNI2Q6ZMN8 FAM215A-202ENST00000632077 792 ntBASIC17.68■□□□□ 0.42
CCNI2Q6ZMN8 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCNI2Q6ZMN8 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CCNI2Q6ZMN8 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.68■□□□□ 0.42
CCNI2Q6ZMN8 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNI2Q6ZMN8 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNI2Q6ZMN8 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCNI2Q6ZMN8 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNI2Q6ZMN8 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNI2Q6ZMN8 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCNI2Q6ZMN8 AC010491.1-201ENST00000563101 2797 ntBASIC17.68■□□□□ 0.42
CCNI2Q6ZMN8 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNI2Q6ZMN8 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNI2Q6ZMN8 AL135999.2-201ENST00000622438 1686 ntBASIC17.67■□□□□ 0.42
CCNI2Q6ZMN8 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNI2Q6ZMN8 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.67■□□□□ 0.42
CCNI2Q6ZMN8 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNI2Q6ZMN8 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CCNI2Q6ZMN8 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.67■□□□□ 0.42
CCNI2Q6ZMN8 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNI2Q6ZMN8 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.67■□□□□ 0.42
CCNI2Q6ZMN8 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CCNI2Q6ZMN8 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.67■□□□□ 0.42
CCNI2Q6ZMN8 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNI2Q6ZMN8 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNI2Q6ZMN8 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.67■□□□□ 0.42
CCNI2Q6ZMN8 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CCNI2Q6ZMN8 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CCNI2Q6ZMN8 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNI2Q6ZMN8 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNI2Q6ZMN8 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNI2Q6ZMN8 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.67■□□□□ 0.42
CCNI2Q6ZMN8 UPF3AP3-201ENST00000420996 769 ntBASIC17.67■□□□□ 0.42
CCNI2Q6ZMN8 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.67■□□□□ 0.42
CCNI2Q6ZMN8 AC098831.1-202ENST00000438821 336 ntBASIC17.67■□□□□ 0.42
CCNI2Q6ZMN8 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCNI2Q6ZMN8 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.67■□□□□ 0.42
CCNI2Q6ZMN8 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.67■□□□□ 0.42
CCNI2Q6ZMN8 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.67■□□□□ 0.42
CCNI2Q6ZMN8 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC17.67■□□□□ 0.42
CCNI2Q6ZMN8 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.67■□□□□ 0.42
CCNI2Q6ZMN8 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.67■□□□□ 0.42
CCNI2Q6ZMN8 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNI2Q6ZMN8 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.67■□□□□ 0.42
CCNI2Q6ZMN8 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CCNI2Q6ZMN8 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNI2Q6ZMN8 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.67■□□□□ 0.42
CCNI2Q6ZMN8 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.67■□□□□ 0.42
CCNI2Q6ZMN8 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.67■□□□□ 0.42
CCNI2Q6ZMN8 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.67■□□□□ 0.42
CCNI2Q6ZMN8 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNI2Q6ZMN8 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.67■□□□□ 0.42
CCNI2Q6ZMN8 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.67■□□□□ 0.42
CCNI2Q6ZMN8 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNI2Q6ZMN8 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CCNI2Q6ZMN8 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCNI2Q6ZMN8 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNI2Q6ZMN8 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNI2Q6ZMN8 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.66■□□□□ 0.42
CCNI2Q6ZMN8 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCNI2Q6ZMN8 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNI2Q6ZMN8 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CCNI2Q6ZMN8 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CCNI2Q6ZMN8 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC17.66■□□□□ 0.42
CCNI2Q6ZMN8 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNI2Q6ZMN8 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
CCNI2Q6ZMN8 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNI2Q6ZMN8 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CCNI2Q6ZMN8 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNI2Q6ZMN8 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CCNI2Q6ZMN8 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNI2Q6ZMN8 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNI2Q6ZMN8 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.66■□□□□ 0.42
CCNI2Q6ZMN8 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC17.66■□□□□ 0.42
CCNI2Q6ZMN8 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CCNI2Q6ZMN8 HLA-J-202ENST00000469281 1241 ntBASIC17.66■□□□□ 0.42
CCNI2Q6ZMN8 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17.66■□□□□ 0.42
CCNI2Q6ZMN8 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCNI2Q6ZMN8 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.66■□□□□ 0.42
CCNI2Q6ZMN8 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.66■□□□□ 0.42
CCNI2Q6ZMN8 AP001160.2-201ENST00000596071 487 ntBASIC17.66■□□□□ 0.42
CCNI2Q6ZMN8 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CCNI2Q6ZMN8 AC116407.3-201ENST00000623905 1129 ntBASIC17.66■□□□□ 0.42
CCNI2Q6ZMN8 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNI2Q6ZMN8 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.66■□□□□ 0.42
CCNI2Q6ZMN8 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNI2Q6ZMN8 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNI2Q6ZMN8 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CCNI2Q6ZMN8 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCNI2Q6ZMN8 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms