Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
FOXR1Q6PIV2 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
FOXR1Q6PIV2 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
FOXR1Q6PIV2 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
FOXR1Q6PIV2 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
FOXR1Q6PIV2 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
FOXR1Q6PIV2 TPO-203ENST00000346956 2923 ntTSL 5 BASIC17.4■□□□□ 0.38
FOXR1Q6PIV2 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.4■□□□□ 0.38
FOXR1Q6PIV2 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
FOXR1Q6PIV2 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
FOXR1Q6PIV2 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
FOXR1Q6PIV2 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.39■□□□□ 0.38
FOXR1Q6PIV2 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
FOXR1Q6PIV2 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FOXR1Q6PIV2 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FOXR1Q6PIV2 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FOXR1Q6PIV2 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
FOXR1Q6PIV2 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
FOXR1Q6PIV2 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FOXR1Q6PIV2 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
FOXR1Q6PIV2 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.39■□□□□ 0.37
FOXR1Q6PIV2 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FOXR1Q6PIV2 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
FOXR1Q6PIV2 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
FOXR1Q6PIV2 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
FOXR1Q6PIV2 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
FOXR1Q6PIV2 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
FOXR1Q6PIV2 RNA5SP419-201ENST00000515908 135 ntBASIC17.39■□□□□ 0.37
FOXR1Q6PIV2 KRT18P58-201ENST00000527480 1120 ntBASIC17.39■□□□□ 0.37
FOXR1Q6PIV2 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.39■□□□□ 0.37
FOXR1Q6PIV2 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.39■□□□□ 0.37
FOXR1Q6PIV2 TERC-201ENST00000602385 541 ntBASIC17.39■□□□□ 0.37
FOXR1Q6PIV2 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.39■□□□□ 0.37
FOXR1Q6PIV2 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
FOXR1Q6PIV2 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.39■□□□□ 0.37
FOXR1Q6PIV2 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FOXR1Q6PIV2 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FOXR1Q6PIV2 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
FOXR1Q6PIV2 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.39■□□□□ 0.37
FOXR1Q6PIV2 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FOXR1Q6PIV2 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
FOXR1Q6PIV2 HLA-A-202ENST00000376806 1854 ntBASIC17.39■□□□□ 0.37
FOXR1Q6PIV2 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC17.39■□□□□ 0.37
FOXR1Q6PIV2 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.39■□□□□ 0.37
FOXR1Q6PIV2 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
FOXR1Q6PIV2 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
FOXR1Q6PIV2 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.39■□□□□ 0.37
FOXR1Q6PIV2 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FOXR1Q6PIV2 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
FOXR1Q6PIV2 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FOXR1Q6PIV2 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
FOXR1Q6PIV2 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FOXR1Q6PIV2 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FOXR1Q6PIV2 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
FOXR1Q6PIV2 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.39■□□□□ 0.37
FOXR1Q6PIV2 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
FOXR1Q6PIV2 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.38■□□□□ 0.37
FOXR1Q6PIV2 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FOXR1Q6PIV2 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FOXR1Q6PIV2 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FOXR1Q6PIV2 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
FOXR1Q6PIV2 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FOXR1Q6PIV2 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FOXR1Q6PIV2 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FOXR1Q6PIV2 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.38■□□□□ 0.37
FOXR1Q6PIV2 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
FOXR1Q6PIV2 AC073648.2-201ENST00000510116 352 ntBASIC17.38■□□□□ 0.37
FOXR1Q6PIV2 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.38■□□□□ 0.37
FOXR1Q6PIV2 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.38■□□□□ 0.37
FOXR1Q6PIV2 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.38■□□□□ 0.37
FOXR1Q6PIV2 AC114341.1-201ENST00000618070 349 ntBASIC17.38■□□□□ 0.37
FOXR1Q6PIV2 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.38■□□□□ 0.37
FOXR1Q6PIV2 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
FOXR1Q6PIV2 AC006058.4-201ENST00000624016 1670 ntBASIC17.38■□□□□ 0.37
FOXR1Q6PIV2 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
FOXR1Q6PIV2 AC022532.1-201ENST00000624563 1728 ntBASIC17.38■□□□□ 0.37
FOXR1Q6PIV2 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
FOXR1Q6PIV2 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
FOXR1Q6PIV2 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FOXR1Q6PIV2 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
FOXR1Q6PIV2 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FOXR1Q6PIV2 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FOXR1Q6PIV2 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC17.37■□□□□ 0.37
FOXR1Q6PIV2 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FOXR1Q6PIV2 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
FOXR1Q6PIV2 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
FOXR1Q6PIV2 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FOXR1Q6PIV2 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC17.37■□□□□ 0.37
FOXR1Q6PIV2 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
FOXR1Q6PIV2 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FOXR1Q6PIV2 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FOXR1Q6PIV2 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.37■□□□□ 0.37
FOXR1Q6PIV2 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
FOXR1Q6PIV2 MIR1233-2-201ENST00000408138 82 ntBASIC17.37■□□□□ 0.37
FOXR1Q6PIV2 MIR1233-1-201ENST00000408722 82 ntBASIC17.37■□□□□ 0.37
FOXR1Q6PIV2 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.37■□□□□ 0.37
FOXR1Q6PIV2 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.37■□□□□ 0.37
FOXR1Q6PIV2 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.37■□□□□ 0.37
FOXR1Q6PIV2 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.37■□□□□ 0.37
FOXR1Q6PIV2 AL049840.3-201ENST00000602669 611 ntBASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms