Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
C11orf88Q6PI97 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
C11orf88Q6PI97 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
C11orf88Q6PI97 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
C11orf88Q6PI97 AC092053.1-201ENST00000605787 1936 ntBASIC14.57□□□□□ -0.08
C11orf88Q6PI97 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
C11orf88Q6PI97 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
C11orf88Q6PI97 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
C11orf88Q6PI97 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
C11orf88Q6PI97 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
C11orf88Q6PI97 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
C11orf88Q6PI97 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC14.57□□□□□ -0.08
C11orf88Q6PI97 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
C11orf88Q6PI97 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
C11orf88Q6PI97 AC005104.2-201ENST00000427818 678 ntBASIC14.57□□□□□ -0.08
C11orf88Q6PI97 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.57□□□□□ -0.08
C11orf88Q6PI97 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC14.57□□□□□ -0.08
C11orf88Q6PI97 FAAHP1-202ENST00000446499 1238 ntBASIC14.57□□□□□ -0.08
C11orf88Q6PI97 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
C11orf88Q6PI97 AC113404.2-201ENST00000507884 177 ntBASIC14.57□□□□□ -0.08
C11orf88Q6PI97 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.57□□□□□ -0.08
C11orf88Q6PI97 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC14.57□□□□□ -0.08
C11orf88Q6PI97 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.57□□□□□ -0.08
C11orf88Q6PI97 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.57□□□□□ -0.08
C11orf88Q6PI97 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
C11orf88Q6PI97 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
C11orf88Q6PI97 LITAF-220ENST00000620789 692 ntTSL 5 BASIC14.57□□□□□ -0.08
C11orf88Q6PI97 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
C11orf88Q6PI97 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC14.57□□□□□ -0.08
C11orf88Q6PI97 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
C11orf88Q6PI97 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
C11orf88Q6PI97 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
C11orf88Q6PI97 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
C11orf88Q6PI97 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
C11orf88Q6PI97 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
C11orf88Q6PI97 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
C11orf88Q6PI97 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
C11orf88Q6PI97 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
C11orf88Q6PI97 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
C11orf88Q6PI97 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
C11orf88Q6PI97 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.57□□□□□ -0.08
C11orf88Q6PI97 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC14.57□□□□□ -0.08
C11orf88Q6PI97 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
C11orf88Q6PI97 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
C11orf88Q6PI97 AC144831.1-201ENST00000573312 2656 ntBASIC14.57□□□□□ -0.08
C11orf88Q6PI97 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC14.57□□□□□ -0.08
C11orf88Q6PI97 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.57□□□□□ -0.08
C11orf88Q6PI97 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.56□□□□□ -0.08
C11orf88Q6PI97 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
C11orf88Q6PI97 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
C11orf88Q6PI97 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
C11orf88Q6PI97 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
C11orf88Q6PI97 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
C11orf88Q6PI97 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
C11orf88Q6PI97 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
C11orf88Q6PI97 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
C11orf88Q6PI97 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
C11orf88Q6PI97 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
C11orf88Q6PI97 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
C11orf88Q6PI97 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
C11orf88Q6PI97 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
C11orf88Q6PI97 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
C11orf88Q6PI97 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
C11orf88Q6PI97 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.56□□□□□ -0.08
C11orf88Q6PI97 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
C11orf88Q6PI97 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC14.56□□□□□ -0.08
C11orf88Q6PI97 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
C11orf88Q6PI97 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC14.56□□□□□ -0.08
C11orf88Q6PI97 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
C11orf88Q6PI97 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.56□□□□□ -0.08
C11orf88Q6PI97 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
C11orf88Q6PI97 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
C11orf88Q6PI97 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
C11orf88Q6PI97 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
C11orf88Q6PI97 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
C11orf88Q6PI97 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.56□□□□□ -0.08
C11orf88Q6PI97 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
C11orf88Q6PI97 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
C11orf88Q6PI97 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
C11orf88Q6PI97 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC14.56□□□□□ -0.08
C11orf88Q6PI97 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.56□□□□□ -0.08
C11orf88Q6PI97 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.56□□□□□ -0.08
C11orf88Q6PI97 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
C11orf88Q6PI97 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC14.56□□□□□ -0.08
C11orf88Q6PI97 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
C11orf88Q6PI97 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
C11orf88Q6PI97 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.56□□□□□ -0.08
C11orf88Q6PI97 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
C11orf88Q6PI97 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
C11orf88Q6PI97 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
C11orf88Q6PI97 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
C11orf88Q6PI97 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
C11orf88Q6PI97 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
C11orf88Q6PI97 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
C11orf88Q6PI97 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC14.55□□□□□ -0.08
C11orf88Q6PI97 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.55□□□□□ -0.08
C11orf88Q6PI97 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
C11orf88Q6PI97 ST20-AS1-201ENST00000560255 4223 ntBASIC14.55□□□□□ -0.08
C11orf88Q6PI97 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
C11orf88Q6PI97 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms