Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNKSR3Q6P9H4 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNKSR3Q6P9H4 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNKSR3Q6P9H4 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNKSR3Q6P9H4 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNKSR3Q6P9H4 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNKSR3Q6P9H4 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNKSR3Q6P9H4 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNKSR3Q6P9H4 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CNKSR3Q6P9H4 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.67■□□□□ 0.42
CNKSR3Q6P9H4 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.67■□□□□ 0.42
CNKSR3Q6P9H4 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC17.67■□□□□ 0.42
CNKSR3Q6P9H4 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CNKSR3Q6P9H4 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.67■□□□□ 0.42
CNKSR3Q6P9H4 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.67■□□□□ 0.42
CNKSR3Q6P9H4 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CNKSR3Q6P9H4 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17.67■□□□□ 0.42
CNKSR3Q6P9H4 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC17.67■□□□□ 0.42
CNKSR3Q6P9H4 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC17.67■□□□□ 0.42
CNKSR3Q6P9H4 AC119751.2-201ENST00000504529 210 ntBASIC17.67■□□□□ 0.42
CNKSR3Q6P9H4 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.67■□□□□ 0.42
CNKSR3Q6P9H4 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.67■□□□□ 0.42
CNKSR3Q6P9H4 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC17.67■□□□□ 0.42
CNKSR3Q6P9H4 ORC6-206ENST00000568364 888 ntTSL 5 BASIC17.67■□□□□ 0.42
CNKSR3Q6P9H4 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CNKSR3Q6P9H4 AC133552.6-201ENST00000613406 534 ntBASIC17.67■□□□□ 0.42
CNKSR3Q6P9H4 COX11-210ENST00000639671 696 ntBASIC17.67■□□□□ 0.42
CNKSR3Q6P9H4 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNKSR3Q6P9H4 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNKSR3Q6P9H4 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CNKSR3Q6P9H4 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.67■□□□□ 0.42
CNKSR3Q6P9H4 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNKSR3Q6P9H4 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CNKSR3Q6P9H4 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CNKSR3Q6P9H4 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CNKSR3Q6P9H4 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
CNKSR3Q6P9H4 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNKSR3Q6P9H4 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNKSR3Q6P9H4 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 GPAA1P2-202ENST00000606848 1787 ntBASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 KRT223P-202ENST00000449164 1292 ntBASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 TIMM17BP1-201ENST00000545713 516 ntBASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 AL033527.4-201ENST00000641026 673 ntBASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNKSR3Q6P9H4 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNKSR3Q6P9H4 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.65■□□□□ 0.42
CNKSR3Q6P9H4 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CNKSR3Q6P9H4 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNKSR3Q6P9H4 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CNKSR3Q6P9H4 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms