Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC12.6□□□□□ -0.39
MRPL54Q6P161 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
MRPL54Q6P161 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
MRPL54Q6P161 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
MRPL54Q6P161 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC12.6□□□□□ -0.39
MRPL54Q6P161 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC12.6□□□□□ -0.39
MRPL54Q6P161 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC12.6□□□□□ -0.39
MRPL54Q6P161 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC12.6□□□□□ -0.39
MRPL54Q6P161 RARRES2P6-201ENST00000567333 442 ntBASIC12.6□□□□□ -0.39
MRPL54Q6P161 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC12.6□□□□□ -0.39
MRPL54Q6P161 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.6□□□□□ -0.39
MRPL54Q6P161 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
MRPL54Q6P161 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
MRPL54Q6P161 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
MRPL54Q6P161 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC12.6□□□□□ -0.39
MRPL54Q6P161 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
MRPL54Q6P161 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
MRPL54Q6P161 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC12.6□□□□□ -0.39
MRPL54Q6P161 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
MRPL54Q6P161 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
MRPL54Q6P161 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
MRPL54Q6P161 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
MRPL54Q6P161 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC12.6□□□□□ -0.39
MRPL54Q6P161 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
MRPL54Q6P161 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC12.6□□□□□ -0.39
MRPL54Q6P161 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
MRPL54Q6P161 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
MRPL54Q6P161 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC12.59□□□□□ -0.39
MRPL54Q6P161 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
MRPL54Q6P161 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
MRPL54Q6P161 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC12.59□□□□□ -0.39
MRPL54Q6P161 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC12.59□□□□□ -0.39
MRPL54Q6P161 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
MRPL54Q6P161 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
MRPL54Q6P161 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
MRPL54Q6P161 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
MRPL54Q6P161 GSN-203ENST00000373808 2664 ntTSL 2 BASIC12.59□□□□□ -0.39
MRPL54Q6P161 HARS-204ENST00000438307 1789 ntTSL 2 BASIC12.59□□□□□ -0.39
MRPL54Q6P161 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
MRPL54Q6P161 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
MRPL54Q6P161 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
MRPL54Q6P161 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
MRPL54Q6P161 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
MRPL54Q6P161 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
MRPL54Q6P161 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
MRPL54Q6P161 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC12.59□□□□□ -0.39
MRPL54Q6P161 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
MRPL54Q6P161 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC12.59□□□□□ -0.39
MRPL54Q6P161 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
MRPL54Q6P161 CNP-204ENST00000472031 1019 ntTSL 2 BASIC12.59□□□□□ -0.39
MRPL54Q6P161 RNA5SP413-201ENST00000516373 109 ntBASIC12.59□□□□□ -0.39
MRPL54Q6P161 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC12.59□□□□□ -0.39
MRPL54Q6P161 TK1-205ENST00000590862 642 ntTSL 3 BASIC12.59□□□□□ -0.39
MRPL54Q6P161 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC12.59□□□□□ -0.39
MRPL54Q6P161 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC12.59□□□□□ -0.39
MRPL54Q6P161 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
MRPL54Q6P161 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
MRPL54Q6P161 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
MRPL54Q6P161 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
MRPL54Q6P161 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
MRPL54Q6P161 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC12.59□□□□□ -0.39
MRPL54Q6P161 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
MRPL54Q6P161 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC12.59□□□□□ -0.39
MRPL54Q6P161 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
MRPL54Q6P161 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC12.59□□□□□ -0.39
MRPL54Q6P161 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
MRPL54Q6P161 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
MRPL54Q6P161 AP003680.1-201ENST00000598970 3660 ntBASIC12.59□□□□□ -0.39
MRPL54Q6P161 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
MRPL54Q6P161 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
MRPL54Q6P161 SRI-203ENST00000419179 1307 ntTSL 2 BASIC12.59□□□□□ -0.39
MRPL54Q6P161 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
MRPL54Q6P161 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC12.59□□□□□ -0.39
MRPL54Q6P161 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
MRPL54Q6P161 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
MRPL54Q6P161 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC12.59□□□□□ -0.39
MRPL54Q6P161 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
MRPL54Q6P161 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
MRPL54Q6P161 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.58□□□□□ -0.39
MRPL54Q6P161 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC12.58□□□□□ -0.39
MRPL54Q6P161 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
MRPL54Q6P161 AC087386.2-201ENST00000623212 4637 ntBASIC12.58□□□□□ -0.39
MRPL54Q6P161 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
MRPL54Q6P161 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.39
MRPL54Q6P161 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.39
MRPL54Q6P161 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
MRPL54Q6P161 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
MRPL54Q6P161 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
MRPL54Q6P161 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC12.58□□□□□ -0.4
MRPL54Q6P161 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
MRPL54Q6P161 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
MRPL54Q6P161 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
MRPL54Q6P161 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
MRPL54Q6P161 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
MRPL54Q6P161 AC026748.1-201ENST00000624349 3251 ntBASIC12.58□□□□□ -0.4
MRPL54Q6P161 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
MRPL54Q6P161 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC12.58□□□□□ -0.4
MRPL54Q6P161 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
MRPL54Q6P161 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC12.58□□□□□ -0.4
MRPL54Q6P161 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms