Protein–RNA interactions for Protein: Q6NVV3

NIPAL1, Magnesium transporter NIPA3, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL1Q6NVV3 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NIPAL1Q6NVV3 HCG4-201ENST00000418983 998 ntBASIC16.08■□□□□ 0.16
NIPAL1Q6NVV3 MED15P5-201ENST00000423150 992 ntBASIC16.08■□□□□ 0.16
NIPAL1Q6NVV3 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.08■□□□□ 0.16
NIPAL1Q6NVV3 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NIPAL1Q6NVV3 HCG4B-203ENST00000450128 991 ntBASIC16.08■□□□□ 0.16
NIPAL1Q6NVV3 SLC25A6P2-201ENST00000497974 877 ntBASIC16.08■□□□□ 0.16
NIPAL1Q6NVV3 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.08■□□□□ 0.16
NIPAL1Q6NVV3 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.08■□□□□ 0.16
NIPAL1Q6NVV3 AC096734.2-201ENST00000562054 433 ntBASIC16.08■□□□□ 0.16
NIPAL1Q6NVV3 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NIPAL1Q6NVV3 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NIPAL1Q6NVV3 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.08■□□□□ 0.16
NIPAL1Q6NVV3 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
NIPAL1Q6NVV3 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NIPAL1Q6NVV3 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NIPAL1Q6NVV3 AL353732.1-201ENST00000569618 1459 ntBASIC16.08■□□□□ 0.16
NIPAL1Q6NVV3 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NIPAL1Q6NVV3 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
NIPAL1Q6NVV3 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NIPAL1Q6NVV3 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NIPAL1Q6NVV3 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NIPAL1Q6NVV3 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NIPAL1Q6NVV3 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
NIPAL1Q6NVV3 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NIPAL1Q6NVV3 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NIPAL1Q6NVV3 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NIPAL1Q6NVV3 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NIPAL1Q6NVV3 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
NIPAL1Q6NVV3 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NIPAL1Q6NVV3 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
NIPAL1Q6NVV3 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
NIPAL1Q6NVV3 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 FAM185BP-201ENST00000443595 716 ntBASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 AC064836.3-201ENST00000607928 673 ntBASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 REXO1L3P-201ENST00000622202 1288 ntBASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NIPAL1Q6NVV3 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.06■□□□□ 0.16
NIPAL1Q6NVV3 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.06■□□□□ 0.16
NIPAL1Q6NVV3 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.06■□□□□ 0.16
NIPAL1Q6NVV3 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.06■□□□□ 0.16
NIPAL1Q6NVV3 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.06■□□□□ 0.16
NIPAL1Q6NVV3 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NIPAL1Q6NVV3 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
NIPAL1Q6NVV3 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.06■□□□□ 0.16
NIPAL1Q6NVV3 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms