Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 AC005336.2-201ENST00000593183 939 ntBASIC13.86□□□□□ -0.19
ANKRD55Q3KP44 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ANKRD55Q3KP44 AC013467.2-201ENST00000605472 835 ntBASIC13.86□□□□□ -0.19
ANKRD55Q3KP44 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC13.86□□□□□ -0.19
ANKRD55Q3KP44 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC13.86□□□□□ -0.19
ANKRD55Q3KP44 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ANKRD55Q3KP44 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
ANKRD55Q3KP44 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC13.86□□□□□ -0.19
ANKRD55Q3KP44 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
ANKRD55Q3KP44 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ANKRD55Q3KP44 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ANKRD55Q3KP44 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ANKRD55Q3KP44 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ANKRD55Q3KP44 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
ANKRD55Q3KP44 AC068587.6-202ENST00000641839 5619 ntBASIC13.86□□□□□ -0.19
ANKRD55Q3KP44 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC13.86□□□□□ -0.19
ANKRD55Q3KP44 AL671710.1-201ENST00000610245 2349 ntBASIC13.86□□□□□ -0.19
ANKRD55Q3KP44 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ANKRD55Q3KP44 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
ANKRD55Q3KP44 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
ANKRD55Q3KP44 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ANKRD55Q3KP44 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
ANKRD55Q3KP44 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC13.86□□□□□ -0.19
ANKRD55Q3KP44 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
ANKRD55Q3KP44 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ANKRD55Q3KP44 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.86□□□□□ -0.19
ANKRD55Q3KP44 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
ANKRD55Q3KP44 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.85□□□□□ -0.19
ANKRD55Q3KP44 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
ANKRD55Q3KP44 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ANKRD55Q3KP44 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ANKRD55Q3KP44 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ANKRD55Q3KP44 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ANKRD55Q3KP44 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ANKRD55Q3KP44 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
ANKRD55Q3KP44 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ANKRD55Q3KP44 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
ANKRD55Q3KP44 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
ANKRD55Q3KP44 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
ANKRD55Q3KP44 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ANKRD55Q3KP44 KRT8P49-201ENST00000604166 1432 ntBASIC13.85□□□□□ -0.19
ANKRD55Q3KP44 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ANKRD55Q3KP44 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ANKRD55Q3KP44 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ANKRD55Q3KP44 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC13.85□□□□□ -0.19
ANKRD55Q3KP44 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ANKRD55Q3KP44 RNF146-204ENST00000476956 884 ntTSL 2 BASIC13.85□□□□□ -0.19
ANKRD55Q3KP44 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC13.85□□□□□ -0.19
ANKRD55Q3KP44 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC13.85□□□□□ -0.19
ANKRD55Q3KP44 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ANKRD55Q3KP44 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
ANKRD55Q3KP44 AL445228.2-201ENST00000605589 952 ntBASIC13.85□□□□□ -0.19
ANKRD55Q3KP44 FGF14-AS2-201ENST00000606448 1074 ntBASIC13.85□□□□□ -0.19
ANKRD55Q3KP44 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
ANKRD55Q3KP44 AL121956.5-201ENST00000625261 221 ntBASIC13.85□□□□□ -0.19
ANKRD55Q3KP44 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ANKRD55Q3KP44 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
ANKRD55Q3KP44 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
ANKRD55Q3KP44 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ANKRD55Q3KP44 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ANKRD55Q3KP44 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ANKRD55Q3KP44 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
ANKRD55Q3KP44 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ANKRD55Q3KP44 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
ANKRD55Q3KP44 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ANKRD55Q3KP44 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
ANKRD55Q3KP44 UBC-206ENST00000538617 1303 ntTSL 5 BASIC13.85□□□□□ -0.19
ANKRD55Q3KP44 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
ANKRD55Q3KP44 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
ANKRD55Q3KP44 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ANKRD55Q3KP44 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ANKRD55Q3KP44 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
ANKRD55Q3KP44 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
ANKRD55Q3KP44 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ANKRD55Q3KP44 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ANKRD55Q3KP44 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ANKRD55Q3KP44 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC13.84□□□□□ -0.19
ANKRD55Q3KP44 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.84□□□□□ -0.19
ANKRD55Q3KP44 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
ANKRD55Q3KP44 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ANKRD55Q3KP44 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
ANKRD55Q3KP44 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.84□□□□□ -0.19
ANKRD55Q3KP44 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
ANKRD55Q3KP44 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC13.84□□□□□ -0.19
ANKRD55Q3KP44 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
ANKRD55Q3KP44 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ANKRD55Q3KP44 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ANKRD55Q3KP44 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
ANKRD55Q3KP44 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
ANKRD55Q3KP44 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC13.84□□□□□ -0.19
ANKRD55Q3KP44 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
ANKRD55Q3KP44 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ANKRD55Q3KP44 AC112907.2-201ENST00000448639 330 ntBASIC13.84□□□□□ -0.19
ANKRD55Q3KP44 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC13.84□□□□□ -0.19
ANKRD55Q3KP44 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
ANKRD55Q3KP44 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC13.84□□□□□ -0.19
ANKRD55Q3KP44 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC13.84□□□□□ -0.19
ANKRD55Q3KP44 AC091076.1-201ENST00000610741 619 ntBASIC13.84□□□□□ -0.19
ANKRD55Q3KP44 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC13.84□□□□□ -0.19
ANKRD55Q3KP44 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms