Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 ALOX12P2-203ENST00000570921 1945 ntBASIC19.97■□□□□ 0.79
RFX7Q2KHR2 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
RFX7Q2KHR2 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC19.97■□□□□ 0.79
RFX7Q2KHR2 AC084018.2-201ENST00000613093 2607 ntBASIC19.97■□□□□ 0.79
RFX7Q2KHR2 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFX7Q2KHR2 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC19.96■□□□□ 0.79
RFX7Q2KHR2 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC19.96■□□□□ 0.79
RFX7Q2KHR2 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC19.96■□□□□ 0.79
RFX7Q2KHR2 AC125807.1-201ENST00000483097 614 ntBASIC19.96■□□□□ 0.79
RFX7Q2KHR2 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC19.96■□□□□ 0.79
RFX7Q2KHR2 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.96■□□□□ 0.79
RFX7Q2KHR2 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RFX7Q2KHR2 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC19.96■□□□□ 0.79
RFX7Q2KHR2 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC19.96■□□□□ 0.79
RFX7Q2KHR2 AJ011932.1-201ENST00000621707 465 ntBASIC19.96■□□□□ 0.79
RFX7Q2KHR2 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC19.96■□□□□ 0.79
RFX7Q2KHR2 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RFX7Q2KHR2 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RFX7Q2KHR2 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.96■□□□□ 0.79
RFX7Q2KHR2 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
RFX7Q2KHR2 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.96■□□□□ 0.79
RFX7Q2KHR2 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RFX7Q2KHR2 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RFX7Q2KHR2 TUBB3P1-201ENST00000405796 1332 ntBASIC19.96■□□□□ 0.79
RFX7Q2KHR2 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFX7Q2KHR2 AC008677.1-201ENST00000519230 1561 ntBASIC19.96■□□□□ 0.79
RFX7Q2KHR2 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RFX7Q2KHR2 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RFX7Q2KHR2 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC19.96■□□□□ 0.79
RFX7Q2KHR2 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RFX7Q2KHR2 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFX7Q2KHR2 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
RFX7Q2KHR2 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFX7Q2KHR2 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
RFX7Q2KHR2 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFX7Q2KHR2 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFX7Q2KHR2 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RFX7Q2KHR2 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
RFX7Q2KHR2 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
RFX7Q2KHR2 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.79
RFX7Q2KHR2 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC19.95■□□□□ 0.79
RFX7Q2KHR2 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC19.95■□□□□ 0.79
RFX7Q2KHR2 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC19.95■□□□□ 0.79
RFX7Q2KHR2 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC19.95■□□□□ 0.79
RFX7Q2KHR2 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
RFX7Q2KHR2 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.79
RFX7Q2KHR2 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.79
RFX7Q2KHR2 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
RFX7Q2KHR2 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
RFX7Q2KHR2 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFX7Q2KHR2 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFX7Q2KHR2 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFX7Q2KHR2 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFX7Q2KHR2 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFX7Q2KHR2 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFX7Q2KHR2 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFX7Q2KHR2 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFX7Q2KHR2 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
RFX7Q2KHR2 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RFX7Q2KHR2 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.95■□□□□ 0.78
RFX7Q2KHR2 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFX7Q2KHR2 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFX7Q2KHR2 UXT-AS1-201ENST00000590504 1525 ntBASIC19.95■□□□□ 0.78
RFX7Q2KHR2 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
RFX7Q2KHR2 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
RFX7Q2KHR2 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RFX7Q2KHR2 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
RFX7Q2KHR2 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19.95■□□□□ 0.78
RFX7Q2KHR2 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFX7Q2KHR2 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
RFX7Q2KHR2 MIR661-201ENST00000384842 89 ntBASIC19.95■□□□□ 0.78
RFX7Q2KHR2 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC19.95■□□□□ 0.78
RFX7Q2KHR2 AC093724.1-201ENST00000448659 1027 ntBASIC19.95■□□□□ 0.78
RFX7Q2KHR2 QPRT-203ENST00000562473 579 ntTSL 3 BASIC19.95■□□□□ 0.78
RFX7Q2KHR2 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC19.95■□□□□ 0.78
RFX7Q2KHR2 AC027307.2-201ENST00000591252 911 ntBASIC19.95■□□□□ 0.78
RFX7Q2KHR2 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFX7Q2KHR2 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
RFX7Q2KHR2 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFX7Q2KHR2 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFX7Q2KHR2 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
RFX7Q2KHR2 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RFX7Q2KHR2 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
RFX7Q2KHR2 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC19.94■□□□□ 0.78
RFX7Q2KHR2 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFX7Q2KHR2 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFX7Q2KHR2 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
RFX7Q2KHR2 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
RFX7Q2KHR2 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
RFX7Q2KHR2 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC19.94■□□□□ 0.78
RFX7Q2KHR2 NARF-206ENST00000457415 1668 ntTSL 5 BASIC19.94■□□□□ 0.78
RFX7Q2KHR2 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC19.94■□□□□ 0.78
RFX7Q2KHR2 FOXO1B-201ENST00000504678 1527 ntBASIC19.94■□□□□ 0.78
RFX7Q2KHR2 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFX7Q2KHR2 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFX7Q2KHR2 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RFX7Q2KHR2 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
RFX7Q2KHR2 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RFX7Q2KHR2 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC19.94■□□□□ 0.78
RFX7Q2KHR2 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms