Protein–RNA interactions for Protein: Q12770

SCAP, Sterol regulatory element-binding protein cleavage-activating protein, humanhuman

Predictions only

Length 1,279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPQ12770 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCAPQ12770 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCAPQ12770 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.1■□□□□ 0.33
SCAPQ12770 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SCAPQ12770 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.1■□□□□ 0.33
SCAPQ12770 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SCAPQ12770 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCAPQ12770 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCAPQ12770 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SCAPQ12770 BCRP1-201ENST00000444246 691 ntBASIC17.1■□□□□ 0.33
SCAPQ12770 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.1■□□□□ 0.33
SCAPQ12770 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.1■□□□□ 0.33
SCAPQ12770 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCAPQ12770 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.1■□□□□ 0.33
SCAPQ12770 AL096865.1-201ENST00000606796 927 ntBASIC17.1■□□□□ 0.33
SCAPQ12770 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCAPQ12770 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCAPQ12770 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC17.1■□□□□ 0.33
SCAPQ12770 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.1■□□□□ 0.33
SCAPQ12770 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCAPQ12770 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SCAPQ12770 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SCAPQ12770 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.1■□□□□ 0.33
SCAPQ12770 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SCAPQ12770 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC17.1■□□□□ 0.33
SCAPQ12770 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCAPQ12770 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCAPQ12770 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCAPQ12770 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCAPQ12770 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SCAPQ12770 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SCAPQ12770 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.1■□□□□ 0.33
SCAPQ12770 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCAPQ12770 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SCAPQ12770 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.1■□□□□ 0.33
SCAPQ12770 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SCAPQ12770 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SCAPQ12770 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SCAPQ12770 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCAPQ12770 AC124067.4-201ENST00000519691 2379 ntBASIC17.09■□□□□ 0.33
SCAPQ12770 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SCAPQ12770 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCAPQ12770 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
SCAPQ12770 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.09■□□□□ 0.33
SCAPQ12770 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.09■□□□□ 0.33
SCAPQ12770 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCAPQ12770 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.09■□□□□ 0.33
SCAPQ12770 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCAPQ12770 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SCAPQ12770 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.09■□□□□ 0.33
SCAPQ12770 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC17.09■□□□□ 0.33
SCAPQ12770 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SCAPQ12770 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SCAPQ12770 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCAPQ12770 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.09■□□□□ 0.33
SCAPQ12770 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SCAPQ12770 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
SCAPQ12770 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCAPQ12770 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCAPQ12770 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCAPQ12770 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SCAPQ12770 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SCAPQ12770 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SCAPQ12770 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SCAPQ12770 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.08■□□□□ 0.33
SCAPQ12770 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.33
SCAPQ12770 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
SCAPQ12770 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.08■□□□□ 0.33
SCAPQ12770 AC006449.5-201ENST00000610658 2098 ntBASIC17.08■□□□□ 0.33
SCAPQ12770 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SCAPQ12770 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.08■□□□□ 0.33
SCAPQ12770 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.08■□□□□ 0.33
SCAPQ12770 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCAPQ12770 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.08■□□□□ 0.32
SCAPQ12770 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.08■□□□□ 0.32
SCAPQ12770 MTHFR-217ENST00000641820 1569 ntBASIC17.08■□□□□ 0.32
SCAPQ12770 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SCAPQ12770 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SCAPQ12770 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
SCAPQ12770 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCAPQ12770 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SCAPQ12770 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCAPQ12770 CD82-202ENST00000342935 967 ntTSL 5 BASIC17.08■□□□□ 0.32
SCAPQ12770 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SCAPQ12770 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCAPQ12770 AC093724.1-201ENST00000448659 1027 ntBASIC17.08■□□□□ 0.32
SCAPQ12770 FAM86C2P-203ENST00000528684 1004 ntBASIC17.08■□□□□ 0.32
SCAPQ12770 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.08■□□□□ 0.32
SCAPQ12770 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.08■□□□□ 0.32
SCAPQ12770 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC17.08■□□□□ 0.32
SCAPQ12770 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.08■□□□□ 0.32
SCAPQ12770 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.08■□□□□ 0.32
SCAPQ12770 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCAPQ12770 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCAPQ12770 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.08■□□□□ 0.32
SCAPQ12770 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SCAPQ12770 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.08■□□□□ 0.32
SCAPQ12770 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCAPQ12770 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SCAPQ12770 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms