Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SCN7AQ01118 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC20.32■□□□□ 0.84
SCN7AQ01118 MFF-223ENST00000524634 647 ntTSL 2 BASIC20.32■□□□□ 0.84
SCN7AQ01118 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC20.32■□□□□ 0.84
SCN7AQ01118 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC20.32■□□□□ 0.84
SCN7AQ01118 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC20.32■□□□□ 0.84
SCN7AQ01118 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC20.32■□□□□ 0.84
SCN7AQ01118 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
SCN7AQ01118 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCN7AQ01118 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SCN7AQ01118 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SCN7AQ01118 HLA-A-202ENST00000376806 1854 ntBASIC20.32■□□□□ 0.84
SCN7AQ01118 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCN7AQ01118 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC20.32■□□□□ 0.84
SCN7AQ01118 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SCN7AQ01118 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC20.32■□□□□ 0.84
SCN7AQ01118 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCN7AQ01118 GRN-214ENST00000589265 1632 ntTSL 5 BASIC20.32■□□□□ 0.84
SCN7AQ01118 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC20.32■□□□□ 0.84
SCN7AQ01118 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SCN7AQ01118 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCN7AQ01118 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCN7AQ01118 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SCN7AQ01118 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCN7AQ01118 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SCN7AQ01118 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC20.32■□□□□ 0.84
SCN7AQ01118 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC20.32■□□□□ 0.84
SCN7AQ01118 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC20.32■□□□□ 0.84
SCN7AQ01118 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SCN7AQ01118 AL442647.2-201ENST00000429864 857 ntBASIC20.32■□□□□ 0.84
SCN7AQ01118 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC20.32■□□□□ 0.84
SCN7AQ01118 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
SCN7AQ01118 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
SCN7AQ01118 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC20.32■□□□□ 0.84
SCN7AQ01118 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC20.32■□□□□ 0.84
SCN7AQ01118 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC20.32■□□□□ 0.84
SCN7AQ01118 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC20.32■□□□□ 0.84
SCN7AQ01118 AC124283.3-201ENST00000570869 594 ntBASIC20.32■□□□□ 0.84
SCN7AQ01118 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC20.32■□□□□ 0.84
SCN7AQ01118 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC20.32■□□□□ 0.84
SCN7AQ01118 BRI3BPP1-201ENST00000594224 787 ntBASIC20.32■□□□□ 0.84
SCN7AQ01118 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
SCN7AQ01118 MIR6775-201ENST00000617557 69 ntBASIC20.32■□□□□ 0.84
SCN7AQ01118 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
SCN7AQ01118 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SCN7AQ01118 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
SCN7AQ01118 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCN7AQ01118 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SCN7AQ01118 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC20.31■□□□□ 0.84
SCN7AQ01118 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCN7AQ01118 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC20.31■□□□□ 0.84
SCN7AQ01118 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCN7AQ01118 CDC14C-201ENST00000428251 1719 ntBASIC20.31■□□□□ 0.84
SCN7AQ01118 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SCN7AQ01118 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.31■□□□□ 0.84
SCN7AQ01118 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
SCN7AQ01118 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SCN7AQ01118 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC20.31■□□□□ 0.84
SCN7AQ01118 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC20.31■□□□□ 0.84
SCN7AQ01118 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC20.31■□□□□ 0.84
SCN7AQ01118 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SCN7AQ01118 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC20.31■□□□□ 0.84
SCN7AQ01118 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC20.31■□□□□ 0.84
SCN7AQ01118 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCN7AQ01118 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCN7AQ01118 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SCN7AQ01118 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
SCN7AQ01118 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCN7AQ01118 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
SCN7AQ01118 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCN7AQ01118 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SCN7AQ01118 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SCN7AQ01118 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SCN7AQ01118 U82695.1-201ENST00000635752 1889 ntBASIC20.31■□□□□ 0.84
SCN7AQ01118 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC20.31■□□□□ 0.84
SCN7AQ01118 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC20.31■□□□□ 0.84
SCN7AQ01118 AC139713.2-201ENST00000641328 2723 ntBASIC20.3■□□□□ 0.84
SCN7AQ01118 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCN7AQ01118 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SCN7AQ01118 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCN7AQ01118 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC20.3■□□□□ 0.84
SCN7AQ01118 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SCN7AQ01118 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
SCN7AQ01118 AMT-232ENST00000636199 1546 ntTSL 5 BASIC20.3■□□□□ 0.84
SCN7AQ01118 NSL1-201ENST00000366976 722 ntTSL 2 BASIC20.3■□□□□ 0.84
SCN7AQ01118 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCN7AQ01118 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SCN7AQ01118 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC20.3■□□□□ 0.84
SCN7AQ01118 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SCN7AQ01118 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCN7AQ01118 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SCN7AQ01118 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SCN7AQ01118 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SCN7AQ01118 AL645608.8-201ENST00000606034 2086 ntBASIC20.29■□□□□ 0.84
SCN7AQ01118 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SCN7AQ01118 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC20.29■□□□□ 0.84
SCN7AQ01118 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
SCN7AQ01118 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC20.29■□□□□ 0.84
SCN7AQ01118 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SCN7AQ01118 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms