Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.02□□□□□ -0.01
SUMO3P55854 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.02□□□□□ -0.01
SUMO3P55854 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.02□□□□□ -0.01
SUMO3P55854 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SUMO3P55854 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
SUMO3P55854 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SUMO3P55854 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.01□□□□□ -0.01
SUMO3P55854 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SUMO3P55854 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SUMO3P55854 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SUMO3P55854 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.01□□□□□ -0.01
SUMO3P55854 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SUMO3P55854 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
SUMO3P55854 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SUMO3P55854 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SUMO3P55854 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SUMO3P55854 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SUMO3P55854 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
SUMO3P55854 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
SUMO3P55854 BX842568.4-201ENST00000421222 227 ntBASIC15.01□□□□□ -0.01
SUMO3P55854 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.01□□□□□ -0.01
SUMO3P55854 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.01□□□□□ -0.01
SUMO3P55854 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC15.01□□□□□ -0.01
SUMO3P55854 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.01□□□□□ -0.01
SUMO3P55854 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.01□□□□□ -0.01
SUMO3P55854 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SUMO3P55854 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.01□□□□□ -0.01
SUMO3P55854 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SUMO3P55854 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SUMO3P55854 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.01□□□□□ -0.01
SUMO3P55854 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.01□□□□□ -0.01
SUMO3P55854 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SUMO3P55854 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.01□□□□□ -0.01
SUMO3P55854 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SUMO3P55854 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SUMO3P55854 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC15.01□□□□□ -0.01
SUMO3P55854 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15□□□□□ -0.01
SUMO3P55854 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SUMO3P55854 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15□□□□□ -0.01
SUMO3P55854 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
SUMO3P55854 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15□□□□□ -0.01
SUMO3P55854 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15□□□□□ -0.01
SUMO3P55854 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
SUMO3P55854 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15□□□□□ -0.01
SUMO3P55854 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SUMO3P55854 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
SUMO3P55854 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SUMO3P55854 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15□□□□□ -0.01
SUMO3P55854 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15□□□□□ -0.01
SUMO3P55854 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15□□□□□ -0.01
SUMO3P55854 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SUMO3P55854 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15□□□□□ -0.01
SUMO3P55854 AL671277.1-201ENST00000429656 993 ntBASIC15□□□□□ -0.01
SUMO3P55854 HTR5BP-201ENST00000430851 1154 ntBASIC15□□□□□ -0.01
SUMO3P55854 ADH5P3-201ENST00000433842 1137 ntBASIC15□□□□□ -0.01
SUMO3P55854 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC15□□□□□ -0.01
SUMO3P55854 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC15□□□□□ -0.01
SUMO3P55854 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15□□□□□ -0.01
SUMO3P55854 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15□□□□□ -0.01
SUMO3P55854 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15□□□□□ -0.01
SUMO3P55854 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC15□□□□□ -0.01
SUMO3P55854 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15□□□□□ -0.01
SUMO3P55854 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
SUMO3P55854 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
SUMO3P55854 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SUMO3P55854 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
SUMO3P55854 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SUMO3P55854 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15□□□□□ -0.01
SUMO3P55854 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15□□□□□ -0.01
SUMO3P55854 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SUMO3P55854 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15□□□□□ -0.01
SUMO3P55854 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15□□□□□ -0.01
SUMO3P55854 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15□□□□□ -0.01
SUMO3P55854 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15□□□□□ -0.01
SUMO3P55854 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15□□□□□ -0.01
SUMO3P55854 ALOX12P2-203ENST00000570921 1945 ntBASIC15□□□□□ -0.01
SUMO3P55854 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
SUMO3P55854 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.99□□□□□ -0.01
SUMO3P55854 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SUMO3P55854 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SUMO3P55854 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
SUMO3P55854 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
SUMO3P55854 MTHFR-217ENST00000641820 1569 ntBASIC14.99□□□□□ -0.01
SUMO3P55854 BSG-215ENST00000618006 1329 ntTSL 2 BASIC14.99□□□□□ -0.01
SUMO3P55854 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
SUMO3P55854 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
SUMO3P55854 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SUMO3P55854 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SUMO3P55854 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.99□□□□□ -0.01
SUMO3P55854 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC14.99□□□□□ -0.01
SUMO3P55854 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SUMO3P55854 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SUMO3P55854 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SUMO3P55854 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.99□□□□□ -0.01
SUMO3P55854 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
SUMO3P55854 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
SUMO3P55854 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SUMO3P55854 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SUMO3P55854 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SUMO3P55854 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms