Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 SPDYE11-202ENST00000450699 704 ntBASIC17.7■□□□□ 0.42
CDH8P55286 AC079140.1-201ENST00000508039 487 ntBASIC17.7■□□□□ 0.42
CDH8P55286 FAM86C2P-203ENST00000528684 1004 ntBASIC17.7■□□□□ 0.42
CDH8P55286 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CDH8P55286 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.7■□□□□ 0.42
CDH8P55286 SPDYE9P-201ENST00000570642 692 ntBASIC17.7■□□□□ 0.42
CDH8P55286 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDH8P55286 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.7■□□□□ 0.42
CDH8P55286 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDH8P55286 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.7■□□□□ 0.42
CDH8P55286 SPDYE10P-202ENST00000612005 668 ntBASIC17.7■□□□□ 0.42
CDH8P55286 SPDYE8P-202ENST00000612377 668 ntBASIC17.7■□□□□ 0.42
CDH8P55286 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
CDH8P55286 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.7■□□□□ 0.42
CDH8P55286 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH8P55286 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDH8P55286 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH8P55286 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH8P55286 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CDH8P55286 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH8P55286 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDH8P55286 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.7■□□□□ 0.42
CDH8P55286 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH8P55286 AL662844.4-201ENST00000606367 2838 ntBASIC17.7■□□□□ 0.42
CDH8P55286 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CDH8P55286 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH8P55286 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
CDH8P55286 AKAP8P1-201ENST00000434743 1349 ntBASIC17.7■□□□□ 0.42
CDH8P55286 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.7■□□□□ 0.42
CDH8P55286 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC17.7■□□□□ 0.42
CDH8P55286 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH8P55286 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDH8P55286 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH8P55286 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH8P55286 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDH8P55286 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH8P55286 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CDH8P55286 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH8P55286 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CDH8P55286 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDH8P55286 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH8P55286 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH8P55286 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.69■□□□□ 0.42
CDH8P55286 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH8P55286 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDH8P55286 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
CDH8P55286 AC004461.1-201ENST00000412461 403 ntBASIC17.69■□□□□ 0.42
CDH8P55286 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.69■□□□□ 0.42
CDH8P55286 DNAJB3-202ENST00000449667 1266 ntBASIC17.69■□□□□ 0.42
CDH8P55286 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.69■□□□□ 0.42
CDH8P55286 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.69■□□□□ 0.42
CDH8P55286 AC022145.2-201ENST00000598203 171 ntBASIC17.69■□□□□ 0.42
CDH8P55286 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.69■□□□□ 0.42
CDH8P55286 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.69■□□□□ 0.42
CDH8P55286 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CDH8P55286 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH8P55286 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH8P55286 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH8P55286 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
CDH8P55286 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDH8P55286 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDH8P55286 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CDH8P55286 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH8P55286 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH8P55286 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CDH8P55286 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDH8P55286 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH8P55286 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDH8P55286 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
CDH8P55286 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH8P55286 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH8P55286 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CDH8P55286 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.68■□□□□ 0.42
CDH8P55286 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC17.68■□□□□ 0.42
CDH8P55286 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.68■□□□□ 0.42
CDH8P55286 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH8P55286 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.68■□□□□ 0.42
CDH8P55286 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH8P55286 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH8P55286 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.68■□□□□ 0.42
CDH8P55286 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
CDH8P55286 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH8P55286 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH8P55286 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.68■□□□□ 0.42
CDH8P55286 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDH8P55286 SPCS2P4-201ENST00000436160 681 ntBASIC17.68■□□□□ 0.42
CDH8P55286 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CDH8P55286 KRT18P34-201ENST00000488218 1270 ntBASIC17.68■□□□□ 0.42
CDH8P55286 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDH8P55286 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.68■□□□□ 0.42
CDH8P55286 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.68■□□□□ 0.42
CDH8P55286 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC17.68■□□□□ 0.42
CDH8P55286 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.68■□□□□ 0.42
CDH8P55286 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.68■□□□□ 0.42
CDH8P55286 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CDH8P55286 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.68■□□□□ 0.42
CDH8P55286 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDH8P55286 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
CDH8P55286 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
CDH8P55286 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms