Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
VCPP55072 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.82■□□□□ 0.44
VCPP55072 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VCPP55072 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
VCPP55072 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
VCPP55072 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.82■□□□□ 0.44
VCPP55072 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.81■□□□□ 0.44
VCPP55072 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
VCPP55072 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.81■□□□□ 0.44
VCPP55072 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.81■□□□□ 0.44
VCPP55072 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
VCPP55072 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.81■□□□□ 0.44
VCPP55072 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
VCPP55072 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.81■□□□□ 0.44
VCPP55072 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VCPP55072 CROCCP1-201ENST00000426910 5675 ntBASIC17.81■□□□□ 0.44
VCPP55072 AL590787.1-201ENST00000568856 1315 ntBASIC17.81■□□□□ 0.44
VCPP55072 UBALD1-205ENST00000590891 2641 ntBASIC17.81■□□□□ 0.44
VCPP55072 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.81■□□□□ 0.44
VCPP55072 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VCPP55072 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
VCPP55072 MIR943-201ENST00000401286 94 ntBASIC17.81■□□□□ 0.44
VCPP55072 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.81■□□□□ 0.44
VCPP55072 ACTG1P4-201ENST00000425123 1122 ntBASIC17.81■□□□□ 0.44
VCPP55072 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.81■□□□□ 0.44
VCPP55072 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.81■□□□□ 0.44
VCPP55072 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC17.81■□□□□ 0.44
VCPP55072 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.81■□□□□ 0.44
VCPP55072 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.81■□□□□ 0.44
VCPP55072 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VCPP55072 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
VCPP55072 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
VCPP55072 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.81■□□□□ 0.44
VCPP55072 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
VCPP55072 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VCPP55072 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.81■□□□□ 0.44
VCPP55072 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
VCPP55072 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
VCPP55072 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.81■□□□□ 0.44
VCPP55072 PI4KAP1-204ENST00000612579 1703 ntBASIC17.81■□□□□ 0.44
VCPP55072 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
VCPP55072 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
VCPP55072 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
VCPP55072 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
VCPP55072 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
VCPP55072 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VCPP55072 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.8■□□□□ 0.44
VCPP55072 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VCPP55072 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC17.8■□□□□ 0.44
VCPP55072 AC245100.3-201ENST00000441281 285 ntBASIC17.8■□□□□ 0.44
VCPP55072 CNN2P2-201ENST00000443536 909 ntBASIC17.8■□□□□ 0.44
VCPP55072 CNN2P3-201ENST00000450201 906 ntBASIC17.8■□□□□ 0.44
VCPP55072 TIMM8BP1-201ENST00000452384 211 ntBASIC17.8■□□□□ 0.44
VCPP55072 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC17.8■□□□□ 0.44
VCPP55072 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.8■□□□□ 0.44
VCPP55072 AC051619.7-201ENST00000568314 623 ntBASIC17.8■□□□□ 0.44
VCPP55072 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VCPP55072 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.8■□□□□ 0.44
VCPP55072 AL136317.3-201ENST00000618497 906 ntBASIC17.8■□□□□ 0.44
VCPP55072 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.8■□□□□ 0.44
VCPP55072 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.8■□□□□ 0.44
VCPP55072 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VCPP55072 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VCPP55072 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.8■□□□□ 0.44
VCPP55072 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
VCPP55072 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
VCPP55072 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VCPP55072 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.8■□□□□ 0.44
VCPP55072 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VCPP55072 AC092919.2-201ENST00000623631 1645 ntBASIC17.8■□□□□ 0.44
VCPP55072 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VCPP55072 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.79■□□□□ 0.44
VCPP55072 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VCPP55072 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
VCPP55072 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.79■□□□□ 0.44
VCPP55072 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
VCPP55072 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
VCPP55072 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VCPP55072 FRMD8P1-201ENST00000440433 1524 ntBASIC17.79■□□□□ 0.44
VCPP55072 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
VCPP55072 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
VCPP55072 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.79■□□□□ 0.44
VCPP55072 PCDHB19P-201ENST00000570871 2371 ntBASIC17.79■□□□□ 0.44
VCPP55072 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VCPP55072 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VCPP55072 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.79■□□□□ 0.44
VCPP55072 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
VCPP55072 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VCPP55072 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
VCPP55072 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VCPP55072 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VCPP55072 FAM207CP-201ENST00000443486 507 ntBASIC17.79■□□□□ 0.44
VCPP55072 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.79■□□□□ 0.44
VCPP55072 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.79■□□□□ 0.44
VCPP55072 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VCPP55072 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VCPP55072 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VCPP55072 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VCPP55072 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VCPP55072 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms