Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
APOC4P55056 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
APOC4P55056 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
APOC4P55056 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
APOC4P55056 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC12.17□□□□□ -0.46
APOC4P55056 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
APOC4P55056 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
APOC4P55056 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
APOC4P55056 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
APOC4P55056 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC12.17□□□□□ -0.46
APOC4P55056 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC12.17□□□□□ -0.46
APOC4P55056 AL391256.1-201ENST00000443260 1855 ntBASIC12.17□□□□□ -0.46
APOC4P55056 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC12.16□□□□□ -0.46
APOC4P55056 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC12.16□□□□□ -0.46
APOC4P55056 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
APOC4P55056 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
APOC4P55056 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC12.16□□□□□ -0.46
APOC4P55056 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
APOC4P55056 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
APOC4P55056 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
APOC4P55056 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
APOC4P55056 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC12.16□□□□□ -0.46
APOC4P55056 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC12.16□□□□□ -0.46
APOC4P55056 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
APOC4P55056 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
APOC4P55056 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
APOC4P55056 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
APOC4P55056 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
APOC4P55056 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
APOC4P55056 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
APOC4P55056 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
APOC4P55056 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC12.16□□□□□ -0.46
APOC4P55056 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
APOC4P55056 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC12.16□□□□□ -0.46
APOC4P55056 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC12.16□□□□□ -0.46
APOC4P55056 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC12.16□□□□□ -0.46
APOC4P55056 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
APOC4P55056 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
APOC4P55056 PTMS-202ENST00000389462 773 ntTSL 2 BASIC12.16□□□□□ -0.46
APOC4P55056 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC12.16□□□□□ -0.46
APOC4P55056 PP14571-201ENST00000404327 934 ntTSL 2 BASIC12.16□□□□□ -0.46
APOC4P55056 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC12.16□□□□□ -0.46
APOC4P55056 RBPMS2P1-201ENST00000437762 623 ntBASIC12.16□□□□□ -0.46
APOC4P55056 CYMP-203ENST00000474680 1263 ntBASIC12.16□□□□□ -0.46
APOC4P55056 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC12.16□□□□□ -0.46
APOC4P55056 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC12.16□□□□□ -0.46
APOC4P55056 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC12.16□□□□□ -0.46
APOC4P55056 PRYP6-201ENST00000514804 343 ntBASIC12.16□□□□□ -0.46
APOC4P55056 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
APOC4P55056 INO80E-210ENST00000567705 880 ntTSL 3 BASIC12.16□□□□□ -0.46
APOC4P55056 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC12.16□□□□□ -0.46
APOC4P55056 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC12.16□□□□□ -0.46
APOC4P55056 AC020765.3-201ENST00000613051 740 ntBASIC12.16□□□□□ -0.46
APOC4P55056 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC12.16□□□□□ -0.46
APOC4P55056 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
APOC4P55056 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
APOC4P55056 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC12.16□□□□□ -0.46
APOC4P55056 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC12.16□□□□□ -0.46
APOC4P55056 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
APOC4P55056 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
APOC4P55056 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC12.16□□□□□ -0.46
APOC4P55056 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
APOC4P55056 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
APOC4P55056 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
APOC4P55056 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
APOC4P55056 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
APOC4P55056 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC12.16□□□□□ -0.46
APOC4P55056 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
APOC4P55056 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
APOC4P55056 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
APOC4P55056 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
APOC4P55056 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
APOC4P55056 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
APOC4P55056 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC12.16□□□□□ -0.46
APOC4P55056 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC12.16□□□□□ -0.46
APOC4P55056 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
APOC4P55056 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
APOC4P55056 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
APOC4P55056 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
APOC4P55056 PP12613-201ENST00000424958 2230 ntBASIC12.15□□□□□ -0.46
APOC4P55056 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
APOC4P55056 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
APOC4P55056 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
APOC4P55056 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
APOC4P55056 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
APOC4P55056 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC12.15□□□□□ -0.46
APOC4P55056 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC12.15□□□□□ -0.46
APOC4P55056 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
APOC4P55056 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
APOC4P55056 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
APOC4P55056 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
APOC4P55056 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
APOC4P55056 AC063926.3-201ENST00000624734 5658 ntBASIC12.15□□□□□ -0.46
APOC4P55056 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
APOC4P55056 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
APOC4P55056 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC12.15□□□□□ -0.46
APOC4P55056 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
APOC4P55056 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC12.15□□□□□ -0.46
APOC4P55056 AP001059.3-201ENST00000619053 235 ntBASIC12.15□□□□□ -0.46
APOC4P55056 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC12.15□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms