Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATN1P54259 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
ATN1P54259 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.22■□□□□ 0.51
ATN1P54259 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
ATN1P54259 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.21■□□□□ 0.51
ATN1P54259 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATN1P54259 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATN1P54259 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
ATN1P54259 ANKRD19P-201ENST00000338192 862 ntBASIC18.21■□□□□ 0.51
ATN1P54259 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC18.21■□□□□ 0.51
ATN1P54259 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.21■□□□□ 0.51
ATN1P54259 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC18.21■□□□□ 0.51
ATN1P54259 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ATN1P54259 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ATN1P54259 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC18.21■□□□□ 0.51
ATN1P54259 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC18.21■□□□□ 0.51
ATN1P54259 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.21■□□□□ 0.51
ATN1P54259 AC008735.3-201ENST00000596646 500 ntBASIC18.21■□□□□ 0.51
ATN1P54259 WFDC1-204ENST00000613603 549 ntBASIC18.21■□□□□ 0.51
ATN1P54259 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
ATN1P54259 AC027348.2-201ENST00000624375 642 ntBASIC18.21■□□□□ 0.51
ATN1P54259 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.21■□□□□ 0.51
ATN1P54259 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
ATN1P54259 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATN1P54259 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.21■□□□□ 0.51
ATN1P54259 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATN1P54259 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
ATN1P54259 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
ATN1P54259 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.2■□□□□ 0.5
ATN1P54259 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.2■□□□□ 0.5
ATN1P54259 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.2■□□□□ 0.5
ATN1P54259 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATN1P54259 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATN1P54259 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ATN1P54259 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.2■□□□□ 0.5
ATN1P54259 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATN1P54259 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATN1P54259 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
ATN1P54259 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.2■□□□□ 0.5
ATN1P54259 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
ATN1P54259 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
ATN1P54259 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.2■□□□□ 0.5
ATN1P54259 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
ATN1P54259 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ATN1P54259 MEP1AP4-201ENST00000423244 1087 ntBASIC18.2■□□□□ 0.5
ATN1P54259 RPS6P14-201ENST00000425165 719 ntBASIC18.2■□□□□ 0.5
ATN1P54259 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ATN1P54259 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.2■□□□□ 0.5
ATN1P54259 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC18.2■□□□□ 0.5
ATN1P54259 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC18.2■□□□□ 0.5
ATN1P54259 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC18.2■□□□□ 0.5
ATN1P54259 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.2■□□□□ 0.5
ATN1P54259 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
ATN1P54259 AC104989.1-201ENST00000519711 778 ntBASIC18.2■□□□□ 0.5
ATN1P54259 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC18.2■□□□□ 0.5
ATN1P54259 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC18.2■□□□□ 0.5
ATN1P54259 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.2■□□□□ 0.5
ATN1P54259 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.2■□□□□ 0.5
ATN1P54259 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
ATN1P54259 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.2■□□□□ 0.5
ATN1P54259 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
ATN1P54259 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.2■□□□□ 0.5
ATN1P54259 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.2■□□□□ 0.5
ATN1P54259 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.19■□□□□ 0.5
ATN1P54259 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ATN1P54259 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
ATN1P54259 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
ATN1P54259 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.19■□□□□ 0.5
ATN1P54259 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
ATN1P54259 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATN1P54259 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATN1P54259 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATN1P54259 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ATN1P54259 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC18.19■□□□□ 0.5
ATN1P54259 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ATN1P54259 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATN1P54259 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
ATN1P54259 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
ATN1P54259 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC18.19■□□□□ 0.5
ATN1P54259 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC18.19■□□□□ 0.5
ATN1P54259 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC18.19■□□□□ 0.5
ATN1P54259 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC18.19■□□□□ 0.5
ATN1P54259 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ATN1P54259 UPF3AP2-201ENST00000457924 1132 ntBASIC18.19■□□□□ 0.5
ATN1P54259 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
ATN1P54259 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
ATN1P54259 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
ATN1P54259 SDHAP3-202ENST00000515467 728 ntBASIC18.19■□□□□ 0.5
ATN1P54259 MFF-223ENST00000524634 647 ntTSL 2 BASIC18.19■□□□□ 0.5
ATN1P54259 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC18.19■□□□□ 0.5
ATN1P54259 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC18.19■□□□□ 0.5
ATN1P54259 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC18.19■□□□□ 0.5
ATN1P54259 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
ATN1P54259 AC108860.2-201ENST00000562760 2183 ntBASIC18.19■□□□□ 0.5
ATN1P54259 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC18.19■□□□□ 0.5
ATN1P54259 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC18.19■□□□□ 0.5
ATN1P54259 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
ATN1P54259 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC18.19■□□□□ 0.5
ATN1P54259 AC093726.1-201ENST00000608064 963 ntBASIC18.19■□□□□ 0.5
ATN1P54259 AC022960.2-201ENST00000616300 666 ntBASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms