Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AC008667.4-201ENST00000607370 168 ntBASIC15.51■□□□□ 0.07
RNF144AP50876 REXO1L3P-201ENST00000622202 1288 ntBASIC15.51■□□□□ 0.07
RNF144AP50876 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF144AP50876 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF144AP50876 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF144AP50876 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RNF144AP50876 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF144AP50876 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
RNF144AP50876 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.51■□□□□ 0.07
RNF144AP50876 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF144AP50876 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.51■□□□□ 0.07
RNF144AP50876 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF144AP50876 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RNF144AP50876 CICP6-201ENST00000457191 2729 ntBASIC15.51■□□□□ 0.07
RNF144AP50876 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF144AP50876 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RNF144AP50876 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.51■□□□□ 0.07
RNF144AP50876 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.5■□□□□ 0.07
RNF144AP50876 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF144AP50876 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
RNF144AP50876 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC15.5■□□□□ 0.07
RNF144AP50876 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF144AP50876 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RNF144AP50876 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF144AP50876 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF144AP50876 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RNF144AP50876 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF144AP50876 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
RNF144AP50876 HYMAI-201ENST00000635591 3347 ntBASIC15.5■□□□□ 0.07
RNF144AP50876 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RNF144AP50876 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RNF144AP50876 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.5■□□□□ 0.07
RNF144AP50876 AC026691.1-201ENST00000602502 2017 ntBASIC15.5■□□□□ 0.07
RNF144AP50876 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
RNF144AP50876 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC15.5■□□□□ 0.07
RNF144AP50876 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF144AP50876 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RNF144AP50876 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF144AP50876 RPS2P28-201ENST00000314255 741 ntBASIC15.5■□□□□ 0.07
RNF144AP50876 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RNF144AP50876 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.5■□□□□ 0.07
RNF144AP50876 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.5■□□□□ 0.07
RNF144AP50876 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.5■□□□□ 0.07
RNF144AP50876 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.5■□□□□ 0.07
RNF144AP50876 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
RNF144AP50876 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.5■□□□□ 0.07
RNF144AP50876 IGHV3-65-201ENST00000523210 341 ntBASIC15.5■□□□□ 0.07
RNF144AP50876 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC15.5■□□□□ 0.07
RNF144AP50876 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.5■□□□□ 0.07
RNF144AP50876 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
RNF144AP50876 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.5■□□□□ 0.07
RNF144AP50876 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC15.5■□□□□ 0.07
RNF144AP50876 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
RNF144AP50876 OR7E47P-204ENST00000575924 449 ntBASIC15.5■□□□□ 0.07
RNF144AP50876 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF144AP50876 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC15.5■□□□□ 0.07
RNF144AP50876 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.5■□□□□ 0.07
RNF144AP50876 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.5■□□□□ 0.07
RNF144AP50876 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
RNF144AP50876 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.5■□□□□ 0.07
RNF144AP50876 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RNF144AP50876 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.5■□□□□ 0.07
RNF144AP50876 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RNF144AP50876 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF144AP50876 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
RNF144AP50876 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RNF144AP50876 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF144AP50876 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF144AP50876 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.5■□□□□ 0.07
RNF144AP50876 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF144AP50876 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF144AP50876 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF144AP50876 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
RNF144AP50876 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF144AP50876 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF144AP50876 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.5■□□□□ 0.07
RNF144AP50876 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
RNF144AP50876 TOP3BP1-201ENST00000420768 1380 ntBASIC15.49■□□□□ 0.07
RNF144AP50876 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF144AP50876 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF144AP50876 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.49■□□□□ 0.07
RNF144AP50876 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RNF144AP50876 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF144AP50876 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF144AP50876 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF144AP50876 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF144AP50876 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF144AP50876 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.49■□□□□ 0.07
RNF144AP50876 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.49■□□□□ 0.07
RNF144AP50876 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF144AP50876 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
RNF144AP50876 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
RNF144AP50876 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF144AP50876 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF144AP50876 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF144AP50876 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.49■□□□□ 0.07
RNF144AP50876 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF144AP50876 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
RNF144AP50876 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
RNF144AP50876 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms