Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TUBP50607 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TUBP50607 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TUBP50607 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.53■□□□□ 0.4
TUBP50607 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TUBP50607 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TUBP50607 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TUBP50607 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
TUBP50607 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TUBP50607 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TUBP50607 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TUBP50607 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TUBP50607 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TUBP50607 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TUBP50607 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TUBP50607 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TUBP50607 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TUBP50607 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TUBP50607 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TUBP50607 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TUBP50607 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TUBP50607 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TUBP50607 DOC2GP-204ENST00000639052 2548 ntBASIC17.52■□□□□ 0.4
TUBP50607 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.52■□□□□ 0.4
TUBP50607 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TUBP50607 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TUBP50607 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TUBP50607 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TUBP50607 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.52■□□□□ 0.4
TUBP50607 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TUBP50607 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
TUBP50607 AC004461.1-201ENST00000412461 403 ntBASIC17.52■□□□□ 0.4
TUBP50607 AC092474.2-201ENST00000424288 719 ntBASIC17.52■□□□□ 0.4
TUBP50607 AL671277.1-201ENST00000429656 993 ntBASIC17.52■□□□□ 0.4
TUBP50607 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.52■□□□□ 0.4
TUBP50607 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.52■□□□□ 0.4
TUBP50607 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
TUBP50607 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TUBP50607 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TUBP50607 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.52■□□□□ 0.4
TUBP50607 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.52■□□□□ 0.4
TUBP50607 AL031055.1-201ENST00000606362 631 ntBASIC17.52■□□□□ 0.4
TUBP50607 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.52■□□□□ 0.4
TUBP50607 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.52■□□□□ 0.4
TUBP50607 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
TUBP50607 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.52■□□□□ 0.4
TUBP50607 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TUBP50607 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TUBP50607 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
TUBP50607 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
TUBP50607 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TUBP50607 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.39
TUBP50607 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TUBP50607 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TUBP50607 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TUBP50607 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
TUBP50607 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TUBP50607 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TUBP50607 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC17.51■□□□□ 0.39
TUBP50607 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.51■□□□□ 0.39
TUBP50607 KRT18P28-201ENST00000453838 1332 ntBASIC17.51■□□□□ 0.39
TUBP50607 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TUBP50607 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBP50607 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.51■□□□□ 0.39
TUBP50607 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TUBP50607 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBP50607 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBP50607 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
TUBP50607 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBP50607 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBP50607 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBP50607 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBP50607 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBP50607 LBH-203ENST00000404397 543 ntTSL 4 BASIC17.51■□□□□ 0.39
TUBP50607 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBP50607 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBP50607 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.51■□□□□ 0.39
TUBP50607 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBP50607 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC17.51■□□□□ 0.39
TUBP50607 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
TUBP50607 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.51■□□□□ 0.39
TUBP50607 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.51■□□□□ 0.39
TUBP50607 AC027612.4-201ENST00000605371 583 ntBASIC17.51■□□□□ 0.39
TUBP50607 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.51■□□□□ 0.39
TUBP50607 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.51■□□□□ 0.39
TUBP50607 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBP50607 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.51■□□□□ 0.39
TUBP50607 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBP50607 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBP50607 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBP50607 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.51■□□□□ 0.39
TUBP50607 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.51■□□□□ 0.39
TUBP50607 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBP50607 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
TUBP50607 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TUBP50607 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TUBP50607 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBP50607 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TUBP50607 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
TUBP50607 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms