Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
USP8P40818 AL136379.1-201ENST00000623471 2642 ntBASIC18.19■□□□□ 0.5
USP8P40818 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.18■□□□□ 0.5
USP8P40818 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
USP8P40818 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.18■□□□□ 0.5
USP8P40818 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
USP8P40818 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP8P40818 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP8P40818 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP8P40818 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP8P40818 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
USP8P40818 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
USP8P40818 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP8P40818 KRT8P49-201ENST00000604166 1432 ntBASIC18.18■□□□□ 0.5
USP8P40818 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP8P40818 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
USP8P40818 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.18■□□□□ 0.5
USP8P40818 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.18■□□□□ 0.5
USP8P40818 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP8P40818 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.18■□□□□ 0.5
USP8P40818 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
USP8P40818 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.18■□□□□ 0.5
USP8P40818 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.18■□□□□ 0.5
USP8P40818 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.18■□□□□ 0.5
USP8P40818 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
USP8P40818 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC18.18■□□□□ 0.5
USP8P40818 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
USP8P40818 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP8P40818 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.18■□□□□ 0.5
USP8P40818 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP8P40818 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC18.18■□□□□ 0.5
USP8P40818 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
USP8P40818 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP8P40818 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP8P40818 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
USP8P40818 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
USP8P40818 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC18.17■□□□□ 0.5
USP8P40818 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
USP8P40818 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.17■□□□□ 0.5
USP8P40818 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
USP8P40818 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP8P40818 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
USP8P40818 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.17■□□□□ 0.5
USP8P40818 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP8P40818 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.17■□□□□ 0.5
USP8P40818 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
USP8P40818 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.17■□□□□ 0.5
USP8P40818 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP8P40818 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP8P40818 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
USP8P40818 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.17■□□□□ 0.5
USP8P40818 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP8P40818 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.17■□□□□ 0.5
USP8P40818 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.17■□□□□ 0.5
USP8P40818 HNRNPDP1-201ENST00000439535 754 ntBASIC18.17■□□□□ 0.5
USP8P40818 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.17■□□□□ 0.5
USP8P40818 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.17■□□□□ 0.5
USP8P40818 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP8P40818 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
USP8P40818 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.17■□□□□ 0.5
USP8P40818 AC148477.8-201ENST00000624298 468 ntBASIC18.17■□□□□ 0.5
USP8P40818 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.17■□□□□ 0.5
USP8P40818 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC18.17■□□□□ 0.5
USP8P40818 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.17■□□□□ 0.5
USP8P40818 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP8P40818 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP8P40818 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP8P40818 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP8P40818 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
USP8P40818 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
USP8P40818 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
USP8P40818 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
USP8P40818 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP8P40818 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
USP8P40818 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.16■□□□□ 0.5
USP8P40818 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
USP8P40818 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
USP8P40818 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.16■□□□□ 0.5
USP8P40818 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP8P40818 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP8P40818 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC18.16■□□□□ 0.5
USP8P40818 BANP-201ENST00000286122 2368 ntTSL 5 BASIC18.16■□□□□ 0.5
USP8P40818 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP8P40818 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.16■□□□□ 0.5
USP8P40818 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
USP8P40818 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP8P40818 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC18.16■□□□□ 0.5
USP8P40818 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.16■□□□□ 0.5
USP8P40818 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC18.16■□□□□ 0.5
USP8P40818 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP8P40818 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.16■□□□□ 0.5
USP8P40818 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP8P40818 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.16■□□□□ 0.5
USP8P40818 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.16■□□□□ 0.5
USP8P40818 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
USP8P40818 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.16■□□□□ 0.5
USP8P40818 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.16■□□□□ 0.5
USP8P40818 PAWRP1-201ENST00000451083 565 ntBASIC18.16■□□□□ 0.5
USP8P40818 AC087163.2-201ENST00000457299 853 ntBASIC18.16■□□□□ 0.5
USP8P40818 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms