Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CEACAM3P40198 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC13.59□□□□□ -0.23
CEACAM3P40198 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC13.59□□□□□ -0.23
CEACAM3P40198 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
CEACAM3P40198 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CEACAM3P40198 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CEACAM3P40198 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.59□□□□□ -0.23
CEACAM3P40198 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC13.59□□□□□ -0.23
CEACAM3P40198 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CEACAM3P40198 PMS2P4-201ENST00000412466 1052 ntBASIC13.59□□□□□ -0.23
CEACAM3P40198 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CEACAM3P40198 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CEACAM3P40198 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC13.59□□□□□ -0.23
CEACAM3P40198 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CEACAM3P40198 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC13.59□□□□□ -0.23
CEACAM3P40198 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC13.59□□□□□ -0.23
CEACAM3P40198 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.59□□□□□ -0.23
CEACAM3P40198 AC021097.1-201ENST00000607902 574 ntBASIC13.59□□□□□ -0.23
CEACAM3P40198 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.59□□□□□ -0.23
CEACAM3P40198 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CEACAM3P40198 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CEACAM3P40198 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CEACAM3P40198 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
CEACAM3P40198 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
CEACAM3P40198 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC13.59□□□□□ -0.23
CEACAM3P40198 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC13.59□□□□□ -0.23
CEACAM3P40198 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CEACAM3P40198 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CEACAM3P40198 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CEACAM3P40198 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC13.59□□□□□ -0.23
CEACAM3P40198 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CEACAM3P40198 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CEACAM3P40198 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
CEACAM3P40198 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC13.58□□□□□ -0.23
CEACAM3P40198 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
CEACAM3P40198 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CEACAM3P40198 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CEACAM3P40198 AC025580.3-201ENST00000617932 1424 ntBASIC13.58□□□□□ -0.24
CEACAM3P40198 SLC9A3P2-201ENST00000447821 2021 ntBASIC13.58□□□□□ -0.24
CEACAM3P40198 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CEACAM3P40198 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CEACAM3P40198 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC13.58□□□□□ -0.24
CEACAM3P40198 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CEACAM3P40198 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
CEACAM3P40198 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CEACAM3P40198 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC13.58□□□□□ -0.24
CEACAM3P40198 KRT19P2-202ENST00000557173 1012 ntBASIC13.58□□□□□ -0.24
CEACAM3P40198 PDPK2P-202ENST00000562415 1191 ntBASIC13.58□□□□□ -0.24
CEACAM3P40198 AC018845.2-201ENST00000568326 409 ntBASIC13.58□□□□□ -0.24
CEACAM3P40198 MIR3909-201ENST00000579518 119 ntBASIC13.58□□□□□ -0.24
CEACAM3P40198 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC13.58□□□□□ -0.24
CEACAM3P40198 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CEACAM3P40198 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CEACAM3P40198 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CEACAM3P40198 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.58□□□□□ -0.24
CEACAM3P40198 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CEACAM3P40198 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CEACAM3P40198 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CEACAM3P40198 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CEACAM3P40198 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
CEACAM3P40198 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CEACAM3P40198 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC13.58□□□□□ -0.24
CEACAM3P40198 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC13.58□□□□□ -0.24
CEACAM3P40198 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CEACAM3P40198 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CEACAM3P40198 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CEACAM3P40198 HARS-203ENST00000431330 1774 ntTSL 2 BASIC13.58□□□□□ -0.24
CEACAM3P40198 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CEACAM3P40198 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC13.58□□□□□ -0.24
CEACAM3P40198 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CEACAM3P40198 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CEACAM3P40198 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CEACAM3P40198 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CEACAM3P40198 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CEACAM3P40198 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CEACAM3P40198 KRT8P39-201ENST00000396270 1433 ntBASIC13.57□□□□□ -0.24
CEACAM3P40198 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
CEACAM3P40198 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CEACAM3P40198 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CEACAM3P40198 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CEACAM3P40198 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
CEACAM3P40198 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
CEACAM3P40198 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CEACAM3P40198 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CEACAM3P40198 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CEACAM3P40198 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CEACAM3P40198 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CEACAM3P40198 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CEACAM3P40198 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CEACAM3P40198 FALEC-201ENST00000416894 566 ntTSL 3 BASIC13.57□□□□□ -0.24
CEACAM3P40198 AC074386.1-202ENST00000463561 864 ntBASIC13.57□□□□□ -0.24
CEACAM3P40198 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC13.57□□□□□ -0.24
CEACAM3P40198 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.57□□□□□ -0.24
CEACAM3P40198 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC13.57□□□□□ -0.24
CEACAM3P40198 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CEACAM3P40198 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC13.57□□□□□ -0.24
CEACAM3P40198 RPS15-207ENST00000591032 550 ntTSL 3 BASIC13.57□□□□□ -0.24
CEACAM3P40198 RPS15-212ENST00000593052 629 ntTSL 2 BASIC13.57□□□□□ -0.24
CEACAM3P40198 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CEACAM3P40198 AC068137.2-201ENST00000605408 478 ntBASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms