Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
KRT20P35900 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.88■□□□□ 0.13
KRT20P35900 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT20P35900 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
KRT20P35900 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.88■□□□□ 0.13
KRT20P35900 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
KRT20P35900 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT20P35900 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT20P35900 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.88■□□□□ 0.13
KRT20P35900 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT20P35900 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
KRT20P35900 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
KRT20P35900 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC15.88■□□□□ 0.13
KRT20P35900 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.88■□□□□ 0.13
KRT20P35900 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC15.88■□□□□ 0.13
KRT20P35900 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT20P35900 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
KRT20P35900 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC15.88■□□□□ 0.13
KRT20P35900 AL353135.1-201ENST00000606729 504 ntBASIC15.88■□□□□ 0.13
KRT20P35900 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.88■□□□□ 0.13
KRT20P35900 AC004706.3-202ENST00000621574 984 ntBASIC15.88■□□□□ 0.13
KRT20P35900 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.88■□□□□ 0.13
KRT20P35900 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
KRT20P35900 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.88■□□□□ 0.13
KRT20P35900 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT20P35900 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT20P35900 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
KRT20P35900 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
KRT20P35900 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT20P35900 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT20P35900 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
KRT20P35900 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
KRT20P35900 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
KRT20P35900 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.88■□□□□ 0.13
KRT20P35900 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.88■□□□□ 0.13
KRT20P35900 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
KRT20P35900 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT20P35900 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
KRT20P35900 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
KRT20P35900 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC15.87■□□□□ 0.13
KRT20P35900 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
KRT20P35900 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
KRT20P35900 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.87■□□□□ 0.13
KRT20P35900 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
KRT20P35900 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
KRT20P35900 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
KRT20P35900 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
KRT20P35900 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
KRT20P35900 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
KRT20P35900 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
KRT20P35900 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
KRT20P35900 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
KRT20P35900 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.87■□□□□ 0.13
KRT20P35900 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
KRT20P35900 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
KRT20P35900 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
KRT20P35900 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.87■□□□□ 0.13
KRT20P35900 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC15.87■□□□□ 0.13
KRT20P35900 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
KRT20P35900 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
KRT20P35900 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.87■□□□□ 0.13
KRT20P35900 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.87■□□□□ 0.13
KRT20P35900 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC15.87■□□□□ 0.13
KRT20P35900 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
KRT20P35900 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.87■□□□□ 0.13
KRT20P35900 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.87■□□□□ 0.13
KRT20P35900 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
KRT20P35900 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
KRT20P35900 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC15.87■□□□□ 0.13
KRT20P35900 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
KRT20P35900 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
KRT20P35900 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC15.87■□□□□ 0.13
KRT20P35900 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
KRT20P35900 HYMAI-201ENST00000635591 3347 ntBASIC15.87■□□□□ 0.13
KRT20P35900 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
KRT20P35900 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
KRT20P35900 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
KRT20P35900 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
KRT20P35900 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
KRT20P35900 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
KRT20P35900 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT20P35900 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
KRT20P35900 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT20P35900 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
KRT20P35900 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT20P35900 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
KRT20P35900 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT20P35900 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT20P35900 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
KRT20P35900 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.86■□□□□ 0.13
KRT20P35900 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
KRT20P35900 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT20P35900 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT20P35900 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.86■□□□□ 0.13
KRT20P35900 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.86■□□□□ 0.13
KRT20P35900 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
KRT20P35900 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.86■□□□□ 0.13
KRT20P35900 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
KRT20P35900 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.86■□□□□ 0.13
KRT20P35900 AC018712.1-201ENST00000455767 687 ntBASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms