Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC15.8■□□□□ 0.12
PTPN6P29350 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC15.8■□□□□ 0.12
PTPN6P29350 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PTPN6P29350 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.8■□□□□ 0.12
PTPN6P29350 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN6P29350 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC15.8■□□□□ 0.12
PTPN6P29350 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.8■□□□□ 0.12
PTPN6P29350 AC004706.3-202ENST00000621574 984 ntBASIC15.8■□□□□ 0.12
PTPN6P29350 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.8■□□□□ 0.12
PTPN6P29350 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN6P29350 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN6P29350 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN6P29350 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN6P29350 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PTPN6P29350 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
PTPN6P29350 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PTPN6P29350 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN6P29350 SLC22A20-204ENST00000530038 1673 ntBASIC15.79■□□□□ 0.12
PTPN6P29350 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN6P29350 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.79■□□□□ 0.12
PTPN6P29350 TEX30-205ENST00000376029 959 ntTSL 2 BASIC15.79■□□□□ 0.12
PTPN6P29350 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC15.79■□□□□ 0.12
PTPN6P29350 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.79■□□□□ 0.12
PTPN6P29350 AC092910.1-201ENST00000482027 1129 ntBASIC15.79■□□□□ 0.12
PTPN6P29350 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC15.79■□□□□ 0.12
PTPN6P29350 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC15.79■□□□□ 0.12
PTPN6P29350 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.79■□□□□ 0.12
PTPN6P29350 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.79■□□□□ 0.12
PTPN6P29350 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN6P29350 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PTPN6P29350 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.79■□□□□ 0.12
PTPN6P29350 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
PTPN6P29350 PAUPAR-201ENST00000630360 2965 ntBASIC15.79■□□□□ 0.12
PTPN6P29350 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN6P29350 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN6P29350 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN6P29350 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.79■□□□□ 0.12
PTPN6P29350 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN6P29350 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN6P29350 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN6P29350 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN6P29350 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN6P29350 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.79■□□□□ 0.12
PTPN6P29350 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
PTPN6P29350 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.78■□□□□ 0.12
PTPN6P29350 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN6P29350 AP002414.3-201ENST00000589352 1468 ntBASIC15.78■□□□□ 0.12
PTPN6P29350 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN6P29350 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN6P29350 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.78■□□□□ 0.12
PTPN6P29350 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN6P29350 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN6P29350 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC15.78■□□□□ 0.12
PTPN6P29350 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN6P29350 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN6P29350 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN6P29350 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN6P29350 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.78■□□□□ 0.12
PTPN6P29350 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.78■□□□□ 0.12
PTPN6P29350 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.78■□□□□ 0.12
PTPN6P29350 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.78■□□□□ 0.12
PTPN6P29350 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.78■□□□□ 0.12
PTPN6P29350 AC073621.1-201ENST00000392730 636 ntBASIC15.78■□□□□ 0.12
PTPN6P29350 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN6P29350 AL022342.1-201ENST00000400363 863 ntBASIC15.78■□□□□ 0.12
PTPN6P29350 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.78■□□□□ 0.12
PTPN6P29350 PTCHD3P3-201ENST00000403073 906 ntBASIC15.78■□□□□ 0.12
PTPN6P29350 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC15.78■□□□□ 0.12
PTPN6P29350 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.78■□□□□ 0.12
PTPN6P29350 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.78■□□□□ 0.12
PTPN6P29350 SLC25A6P2-201ENST00000497974 877 ntBASIC15.78■□□□□ 0.12
PTPN6P29350 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.78■□□□□ 0.12
PTPN6P29350 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.78■□□□□ 0.12
PTPN6P29350 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.78■□□□□ 0.12
PTPN6P29350 RPS29-206ENST00000557111 488 ntTSL 2 BASIC15.78■□□□□ 0.12
PTPN6P29350 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.78■□□□□ 0.12
PTPN6P29350 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.78■□□□□ 0.12
PTPN6P29350 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC15.78■□□□□ 0.12
PTPN6P29350 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PTPN6P29350 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.78■□□□□ 0.12
PTPN6P29350 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
PTPN6P29350 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN6P29350 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN6P29350 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN6P29350 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN6P29350 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.78■□□□□ 0.12
PTPN6P29350 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.78■□□□□ 0.12
PTPN6P29350 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN6P29350 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.78■□□□□ 0.12
PTPN6P29350 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN6P29350 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
PTPN6P29350 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN6P29350 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
PTPN6P29350 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
PTPN6P29350 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN6P29350 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.77■□□□□ 0.12
PTPN6P29350 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.77■□□□□ 0.12
PTPN6P29350 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PTPN6P29350 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.77■□□□□ 0.12
PTPN6P29350 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 68.7 ms