Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DMAP28067 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DMAP28067 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DMAP28067 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DMAP28067 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
HLA-DMAP28067 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DMAP28067 MIR718-201ENST00000390190 70 ntBASIC14.44□□□□□ -0.1
HLA-DMAP28067 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
HLA-DMAP28067 AC026396.1-201ENST00000419388 421 ntBASIC14.44□□□□□ -0.1
HLA-DMAP28067 HLA-F-220ENST00000434407 884 ntBASIC14.44□□□□□ -0.1
HLA-DMAP28067 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC14.44□□□□□ -0.1
HLA-DMAP28067 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC14.44□□□□□ -0.1
HLA-DMAP28067 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC14.44□□□□□ -0.1
HLA-DMAP28067 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC14.44□□□□□ -0.1
HLA-DMAP28067 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC14.44□□□□□ -0.1
HLA-DMAP28067 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC14.44□□□□□ -0.1
HLA-DMAP28067 ZNF444P1-201ENST00000559497 298 ntBASIC14.44□□□□□ -0.1
HLA-DMAP28067 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC14.44□□□□□ -0.1
HLA-DMAP28067 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC14.44□□□□□ -0.1
HLA-DMAP28067 AC111152.3-201ENST00000569699 673 ntBASIC14.44□□□□□ -0.1
HLA-DMAP28067 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
HLA-DMAP28067 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DMAP28067 SNX21-213ENST00000614929 587 ntTSL 5 BASIC14.44□□□□□ -0.1
HLA-DMAP28067 AL023973.1-201ENST00000624619 620 ntBASIC14.44□□□□□ -0.1
HLA-DMAP28067 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DMAP28067 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
HLA-DMAP28067 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.44□□□□□ -0.1
HLA-DMAP28067 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.44□□□□□ -0.1
HLA-DMAP28067 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC14.44□□□□□ -0.1
HLA-DMAP28067 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DMAP28067 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DMAP28067 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
HLA-DMAP28067 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DMAP28067 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.44□□□□□ -0.1
HLA-DMAP28067 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DMAP28067 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
HLA-DMAP28067 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
HLA-DMAP28067 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
HLA-DMAP28067 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC14.44□□□□□ -0.1
HLA-DMAP28067 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.43□□□□□ -0.1
HLA-DMAP28067 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DMAP28067 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
HLA-DMAP28067 AC106881.1-201ENST00000605849 3329 ntBASIC14.43□□□□□ -0.1
HLA-DMAP28067 AL135999.2-201ENST00000622438 1686 ntBASIC14.43□□□□□ -0.1
HLA-DMAP28067 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DMAP28067 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
HLA-DMAP28067 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
HLA-DMAP28067 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DMAP28067 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
HLA-DMAP28067 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DMAP28067 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
HLA-DMAP28067 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
HLA-DMAP28067 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DMAP28067 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DMAP28067 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC14.43□□□□□ -0.1
HLA-DMAP28067 CRAT-202ENST00000393384 973 ntTSL 2 BASIC14.43□□□□□ -0.1
HLA-DMAP28067 FAM8A6P-201ENST00000407496 1135 ntBASIC14.43□□□□□ -0.1
HLA-DMAP28067 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
HLA-DMAP28067 AC007967.3-201ENST00000434308 558 ntBASIC14.43□□□□□ -0.1
HLA-DMAP28067 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC14.43□□□□□ -0.1
HLA-DMAP28067 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DMAP28067 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC14.43□□□□□ -0.1
HLA-DMAP28067 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DMAP28067 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DMAP28067 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC14.43□□□□□ -0.1
HLA-DMAP28067 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC14.43□□□□□ -0.1
HLA-DMAP28067 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC14.43□□□□□ -0.1
HLA-DMAP28067 LINC01101-201ENST00000622953 1884 ntBASIC14.43□□□□□ -0.1
HLA-DMAP28067 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DMAP28067 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.43□□□□□ -0.1
HLA-DMAP28067 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.43□□□□□ -0.1
HLA-DMAP28067 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DMAP28067 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.43□□□□□ -0.1
HLA-DMAP28067 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DMAP28067 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
HLA-DMAP28067 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
HLA-DMAP28067 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
HLA-DMAP28067 LINC00528-201ENST00000600723 2160 ntBASIC14.43□□□□□ -0.1
HLA-DMAP28067 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.43□□□□□ -0.1
HLA-DMAP28067 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DMAP28067 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DMAP28067 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DMAP28067 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DMAP28067 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.43□□□□□ -0.1
HLA-DMAP28067 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.43□□□□□ -0.1
HLA-DMAP28067 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
HLA-DMAP28067 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.43□□□□□ -0.1
HLA-DMAP28067 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.42□□□□□ -0.1
HLA-DMAP28067 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC14.42□□□□□ -0.1
HLA-DMAP28067 KRT17P2-201ENST00000300992 1314 ntBASIC14.42□□□□□ -0.1
HLA-DMAP28067 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.42□□□□□ -0.1
HLA-DMAP28067 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
HLA-DMAP28067 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DMAP28067 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC14.42□□□□□ -0.1
HLA-DMAP28067 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DMAP28067 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.42□□□□□ -0.1
HLA-DMAP28067 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DMAP28067 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
HLA-DMAP28067 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.42□□□□□ -0.1
HLA-DMAP28067 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms