Protein–RNA interactions for Protein: P17029

ZKSCAN1, Zinc finger protein with KRAB and SCAN domains 1, humanhuman

Predicted RBP Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN1P17029 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
ZKSCAN1P17029 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ZKSCAN1P17029 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ZKSCAN1P17029 CD82-202ENST00000342935 967 ntTSL 5 BASIC20.07■□□□□ 0.8
ZKSCAN1P17029 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC20.07■□□□□ 0.8
ZKSCAN1P17029 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC20.07■□□□□ 0.8
ZKSCAN1P17029 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZKSCAN1P17029 PNMT-202ENST00000394246 821 ntTSL 2 BASIC20.07■□□□□ 0.8
ZKSCAN1P17029 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
ZKSCAN1P17029 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
ZKSCAN1P17029 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC20.07■□□□□ 0.8
ZKSCAN1P17029 MKNK2P1-201ENST00000437526 628 ntBASIC20.07■□□□□ 0.8
ZKSCAN1P17029 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC20.07■□□□□ 0.8
ZKSCAN1P17029 IGHV3-65-201ENST00000523210 341 ntBASIC20.07■□□□□ 0.8
ZKSCAN1P17029 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC20.07■□□□□ 0.8
ZKSCAN1P17029 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC20.07■□□□□ 0.8
ZKSCAN1P17029 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC20.07■□□□□ 0.8
ZKSCAN1P17029 ORC5-208ENST00000626700 344 ntTSL 3 BASIC20.07■□□□□ 0.8
ZKSCAN1P17029 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZKSCAN1P17029 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZKSCAN1P17029 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
ZKSCAN1P17029 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
ZKSCAN1P17029 AC131009.4-201ENST00000624048 1740 ntBASIC20.07■□□□□ 0.8
ZKSCAN1P17029 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC20.07■□□□□ 0.8
ZKSCAN1P17029 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
ZKSCAN1P17029 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
ZKSCAN1P17029 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
ZKSCAN1P17029 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZKSCAN1P17029 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZKSCAN1P17029 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZKSCAN1P17029 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZKSCAN1P17029 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
ZKSCAN1P17029 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC20.06■□□□□ 0.8
ZKSCAN1P17029 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZKSCAN1P17029 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZKSCAN1P17029 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZKSCAN1P17029 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC20.06■□□□□ 0.8
ZKSCAN1P17029 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZKSCAN1P17029 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
ZKSCAN1P17029 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZKSCAN1P17029 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC20.06■□□□□ 0.8
ZKSCAN1P17029 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZKSCAN1P17029 STK24-203ENST00000397517 4578 ntTSL 2 BASIC20.06■□□□□ 0.8
ZKSCAN1P17029 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC20.06■□□□□ 0.8
ZKSCAN1P17029 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC20.06■□□□□ 0.8
ZKSCAN1P17029 HCG4B-203ENST00000450128 991 ntBASIC20.06■□□□□ 0.8
ZKSCAN1P17029 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ZKSCAN1P17029 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC20.06■□□□□ 0.8
ZKSCAN1P17029 MIR4492-201ENST00000581627 80 ntBASIC20.06■□□□□ 0.8
ZKSCAN1P17029 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC20.06■□□□□ 0.8
ZKSCAN1P17029 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
ZKSCAN1P17029 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC20.06■□□□□ 0.8
ZKSCAN1P17029 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZKSCAN1P17029 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZKSCAN1P17029 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ZKSCAN1P17029 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC20.06■□□□□ 0.8
ZKSCAN1P17029 ELL2P1-201ENST00000413990 1906 ntBASIC20.06■□□□□ 0.8
ZKSCAN1P17029 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ZKSCAN1P17029 HARS-204ENST00000438307 1789 ntTSL 2 BASIC20.06■□□□□ 0.8
ZKSCAN1P17029 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZKSCAN1P17029 AL353732.1-201ENST00000569618 1459 ntBASIC20.05■□□□□ 0.8
ZKSCAN1P17029 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZKSCAN1P17029 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC20.05■□□□□ 0.8
ZKSCAN1P17029 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZKSCAN1P17029 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC20.05■□□□□ 0.8
ZKSCAN1P17029 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZKSCAN1P17029 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZKSCAN1P17029 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
ZKSCAN1P17029 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
ZKSCAN1P17029 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC20.05■□□□□ 0.8
ZKSCAN1P17029 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
ZKSCAN1P17029 CEND1P1-201ENST00000451006 455 ntBASIC20.05■□□□□ 0.8
ZKSCAN1P17029 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC20.05■□□□□ 0.8
ZKSCAN1P17029 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC20.05■□□□□ 0.8
ZKSCAN1P17029 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC20.05■□□□□ 0.8
ZKSCAN1P17029 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC20.05■□□□□ 0.8
ZKSCAN1P17029 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC20.05■□□□□ 0.8
ZKSCAN1P17029 AC107918.2-201ENST00000530817 355 ntBASIC20.05■□□□□ 0.8
ZKSCAN1P17029 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
ZKSCAN1P17029 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC20.05■□□□□ 0.8
ZKSCAN1P17029 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZKSCAN1P17029 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ZKSCAN1P17029 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZKSCAN1P17029 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZKSCAN1P17029 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ZKSCAN1P17029 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ZKSCAN1P17029 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC20.05■□□□□ 0.8
ZKSCAN1P17029 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ZKSCAN1P17029 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC20.05■□□□□ 0.8
ZKSCAN1P17029 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZKSCAN1P17029 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
ZKSCAN1P17029 WT1-209ENST00000530998 2421 ntTSL 2 BASIC20.04■□□□□ 0.8
ZKSCAN1P17029 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZKSCAN1P17029 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZKSCAN1P17029 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZKSCAN1P17029 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ZKSCAN1P17029 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ZKSCAN1P17029 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ZKSCAN1P17029 PRSS29P-201ENST00000440800 595 ntBASIC20.04■□□□□ 0.8
ZKSCAN1P17029 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms