Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DOBP13765 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DOBP13765 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DOBP13765 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DOBP13765 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DOBP13765 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
HLA-DOBP13765 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.91□□□□□ -0.02
HLA-DOBP13765 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
HLA-DOBP13765 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DOBP13765 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DOBP13765 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
HLA-DOBP13765 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DOBP13765 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DOBP13765 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.91□□□□□ -0.02
HLA-DOBP13765 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.91□□□□□ -0.02
HLA-DOBP13765 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC14.91□□□□□ -0.02
HLA-DOBP13765 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DOBP13765 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
HLA-DOBP13765 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DOBP13765 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.91□□□□□ -0.02
HLA-DOBP13765 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.91□□□□□ -0.02
HLA-DOBP13765 HMGA1P7-201ENST00000406908 502 ntBASIC14.91□□□□□ -0.02
HLA-DOBP13765 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
HLA-DOBP13765 AC007967.2-201ENST00000432613 625 ntBASIC14.91□□□□□ -0.02
HLA-DOBP13765 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
HLA-DOBP13765 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
HLA-DOBP13765 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DOBP13765 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DOBP13765 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
HLA-DOBP13765 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.91□□□□□ -0.02
HLA-DOBP13765 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DOBP13765 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DOBP13765 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DOBP13765 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DOBP13765 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DOBP13765 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
HLA-DOBP13765 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DOBP13765 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DOBP13765 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DOBP13765 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DOBP13765 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DOBP13765 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.9□□□□□ -0.02
HLA-DOBP13765 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DOBP13765 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
HLA-DOBP13765 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DOBP13765 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.9□□□□□ -0.02
HLA-DOBP13765 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DOBP13765 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DOBP13765 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DOBP13765 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
HLA-DOBP13765 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DOBP13765 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DOBP13765 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.9□□□□□ -0.02
HLA-DOBP13765 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
HLA-DOBP13765 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.9□□□□□ -0.02
HLA-DOBP13765 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.9□□□□□ -0.02
HLA-DOBP13765 KRT18P2-201ENST00000447938 1258 ntBASIC14.9□□□□□ -0.02
HLA-DOBP13765 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.9□□□□□ -0.02
HLA-DOBP13765 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.9□□□□□ -0.02
HLA-DOBP13765 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
HLA-DOBP13765 AC120114.3-201ENST00000611923 658 ntBASIC14.9□□□□□ -0.02
HLA-DOBP13765 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DOBP13765 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC14.9□□□□□ -0.02
HLA-DOBP13765 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DOBP13765 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
HLA-DOBP13765 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
HLA-DOBP13765 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DOBP13765 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DOBP13765 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DOBP13765 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DOBP13765 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DOBP13765 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.9□□□□□ -0.02
HLA-DOBP13765 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DOBP13765 DOC2GP-204ENST00000639052 2548 ntBASIC14.9□□□□□ -0.02
HLA-DOBP13765 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DOBP13765 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HLA-DOBP13765 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.89□□□□□ -0.03
HLA-DOBP13765 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.89□□□□□ -0.03
HLA-DOBP13765 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
HLA-DOBP13765 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.89□□□□□ -0.03
HLA-DOBP13765 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DOBP13765 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DOBP13765 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.89□□□□□ -0.03
HLA-DOBP13765 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DOBP13765 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DOBP13765 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC14.89□□□□□ -0.03
HLA-DOBP13765 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DOBP13765 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DOBP13765 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DOBP13765 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DOBP13765 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
HLA-DOBP13765 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
HLA-DOBP13765 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
HLA-DOBP13765 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HLA-DOBP13765 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
HLA-DOBP13765 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.89□□□□□ -0.03
HLA-DOBP13765 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
HLA-DOBP13765 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.89□□□□□ -0.03
HLA-DOBP13765 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
HLA-DOBP13765 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms