Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC21.85■■□□□ 1.09
CSB-PGBD3P0DP91 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CSB-PGBD3P0DP91 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
CSB-PGBD3P0DP91 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CSB-PGBD3P0DP91 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CSB-PGBD3P0DP91 SNX33P1-201ENST00000592116 1762 ntBASIC21.84■■□□□ 1.09
CSB-PGBD3P0DP91 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CSB-PGBD3P0DP91 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC21.84■■□□□ 1.09
CSB-PGBD3P0DP91 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CSB-PGBD3P0DP91 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CSB-PGBD3P0DP91 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC21.84■■□□□ 1.09
CSB-PGBD3P0DP91 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
CSB-PGBD3P0DP91 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CSB-PGBD3P0DP91 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CSB-PGBD3P0DP91 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CSB-PGBD3P0DP91 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CSB-PGBD3P0DP91 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CSB-PGBD3P0DP91 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC21.84■■□□□ 1.09
CSB-PGBD3P0DP91 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
CSB-PGBD3P0DP91 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CSB-PGBD3P0DP91 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CSB-PGBD3P0DP91 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CSB-PGBD3P0DP91 TTTY23B-201ENST00000442790 549 ntBASIC21.84■■□□□ 1.09
CSB-PGBD3P0DP91 MYCLP2-201ENST00000449268 967 ntBASIC21.84■■□□□ 1.09
CSB-PGBD3P0DP91 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC21.84■■□□□ 1.09
CSB-PGBD3P0DP91 RN7SL837P-201ENST00000463010 287 ntBASIC21.84■■□□□ 1.09
CSB-PGBD3P0DP91 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC21.84■■□□□ 1.09
CSB-PGBD3P0DP91 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC21.84■■□□□ 1.09
CSB-PGBD3P0DP91 AC024267.1-201ENST00000582320 895 ntBASIC21.84■■□□□ 1.09
CSB-PGBD3P0DP91 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC21.84■■□□□ 1.09
CSB-PGBD3P0DP91 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC21.84■■□□□ 1.09
CSB-PGBD3P0DP91 AC004461.2-201ENST00000629517 803 ntBASIC21.84■■□□□ 1.09
CSB-PGBD3P0DP91 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC21.84■■□□□ 1.09
CSB-PGBD3P0DP91 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
CSB-PGBD3P0DP91 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CSB-PGBD3P0DP91 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
CSB-PGBD3P0DP91 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CSB-PGBD3P0DP91 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC21.84■■□□□ 1.09
CSB-PGBD3P0DP91 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CSB-PGBD3P0DP91 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CSB-PGBD3P0DP91 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CSB-PGBD3P0DP91 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
CSB-PGBD3P0DP91 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CSB-PGBD3P0DP91 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
CSB-PGBD3P0DP91 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC21.83■■□□□ 1.09
CSB-PGBD3P0DP91 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
CSB-PGBD3P0DP91 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CSB-PGBD3P0DP91 AL390961.4-201ENST00000623958 2535 ntBASIC21.83■■□□□ 1.09
CSB-PGBD3P0DP91 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CSB-PGBD3P0DP91 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC21.83■■□□□ 1.09
CSB-PGBD3P0DP91 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CSB-PGBD3P0DP91 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CSB-PGBD3P0DP91 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CSB-PGBD3P0DP91 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CSB-PGBD3P0DP91 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CSB-PGBD3P0DP91 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC21.83■■□□□ 1.09
CSB-PGBD3P0DP91 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC21.83■■□□□ 1.09
CSB-PGBD3P0DP91 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC21.83■■□□□ 1.09
CSB-PGBD3P0DP91 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
CSB-PGBD3P0DP91 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC21.83■■□□□ 1.09
CSB-PGBD3P0DP91 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC21.83■■□□□ 1.09
CSB-PGBD3P0DP91 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC21.83■■□□□ 1.09
CSB-PGBD3P0DP91 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC21.83■■□□□ 1.09
CSB-PGBD3P0DP91 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC21.83■■□□□ 1.09
CSB-PGBD3P0DP91 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
CSB-PGBD3P0DP91 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CSB-PGBD3P0DP91 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CSB-PGBD3P0DP91 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC21.83■■□□□ 1.08
CSB-PGBD3P0DP91 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CSB-PGBD3P0DP91 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CSB-PGBD3P0DP91 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CSB-PGBD3P0DP91 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CSB-PGBD3P0DP91 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CSB-PGBD3P0DP91 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CSB-PGBD3P0DP91 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CSB-PGBD3P0DP91 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
CSB-PGBD3P0DP91 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CSB-PGBD3P0DP91 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CSB-PGBD3P0DP91 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CSB-PGBD3P0DP91 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
CSB-PGBD3P0DP91 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC21.82■■□□□ 1.08
CSB-PGBD3P0DP91 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CSB-PGBD3P0DP91 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CSB-PGBD3P0DP91 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CSB-PGBD3P0DP91 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CSB-PGBD3P0DP91 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
CSB-PGBD3P0DP91 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC21.82■■□□□ 1.08
CSB-PGBD3P0DP91 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CSB-PGBD3P0DP91 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CSB-PGBD3P0DP91 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CSB-PGBD3P0DP91 AC106886.1-201ENST00000568660 600 ntBASIC21.82■■□□□ 1.08
CSB-PGBD3P0DP91 AC026979.3-201ENST00000607315 403 ntBASIC21.82■■□□□ 1.08
CSB-PGBD3P0DP91 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CSB-PGBD3P0DP91 CROCCP2-202ENST00000412962 2773 ntBASIC21.82■■□□□ 1.08
CSB-PGBD3P0DP91 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC21.82■■□□□ 1.08
CSB-PGBD3P0DP91 KRT8P12-202ENST00000472924 1397 ntBASIC21.82■■□□□ 1.08
CSB-PGBD3P0DP91 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC21.82■■□□□ 1.08
CSB-PGBD3P0DP91 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CSB-PGBD3P0DP91 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC21.82■■□□□ 1.08
CSB-PGBD3P0DP91 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms