Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.68■□□□□ 0.1
CTSBP07858 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTSBP07858 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CTSBP07858 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CTSBP07858 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTSBP07858 TUBB3P1-201ENST00000405796 1332 ntBASIC15.68■□□□□ 0.1
CTSBP07858 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.68■□□□□ 0.1
CTSBP07858 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CTSBP07858 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CTSBP07858 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC15.68■□□□□ 0.1
CTSBP07858 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
CTSBP07858 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.67■□□□□ 0.1
CTSBP07858 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CTSBP07858 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.67■□□□□ 0.1
CTSBP07858 GGT3P-204ENST00000453783 1664 ntBASIC15.67■□□□□ 0.1
CTSBP07858 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTSBP07858 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTSBP07858 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CTSBP07858 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTSBP07858 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTSBP07858 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTSBP07858 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.67■□□□□ 0.1
CTSBP07858 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTSBP07858 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.67■□□□□ 0.1
CTSBP07858 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC15.67■□□□□ 0.1
CTSBP07858 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.67■□□□□ 0.1
CTSBP07858 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.67■□□□□ 0.1
CTSBP07858 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.67■□□□□ 0.1
CTSBP07858 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.67■□□□□ 0.1
CTSBP07858 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.67■□□□□ 0.1
CTSBP07858 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTSBP07858 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC15.67■□□□□ 0.1
CTSBP07858 MIR6080-201ENST00000617359 66 ntBASIC15.67■□□□□ 0.1
CTSBP07858 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTSBP07858 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CTSBP07858 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.67■□□□□ 0.1
CTSBP07858 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTSBP07858 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.67■□□□□ 0.1
CTSBP07858 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.67■□□□□ 0.1
CTSBP07858 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CTSBP07858 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.66■□□□□ 0.1
CTSBP07858 AC138932.1-201ENST00000534164 6830 ntBASIC15.66■□□□□ 0.1
CTSBP07858 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.66■□□□□ 0.1
CTSBP07858 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.66■□□□□ 0.1
CTSBP07858 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTSBP07858 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.66■□□□□ 0.1
CTSBP07858 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTSBP07858 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTSBP07858 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTSBP07858 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTSBP07858 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.66■□□□□ 0.1
CTSBP07858 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC15.66■□□□□ 0.1
CTSBP07858 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
CTSBP07858 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CTSBP07858 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTSBP07858 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CTSBP07858 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTSBP07858 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTSBP07858 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTSBP07858 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
CTSBP07858 FAM86GP-201ENST00000448322 971 ntBASIC15.66■□□□□ 0.1
CTSBP07858 HLA-J-202ENST00000469281 1241 ntBASIC15.66■□□□□ 0.1
CTSBP07858 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.66■□□□□ 0.1
CTSBP07858 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTSBP07858 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.66■□□□□ 0.1
CTSBP07858 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.66■□□□□ 0.1
CTSBP07858 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.66■□□□□ 0.1
CTSBP07858 RARRES2P9-201ENST00000565168 469 ntBASIC15.66■□□□□ 0.1
CTSBP07858 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CTSBP07858 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.66■□□□□ 0.1
CTSBP07858 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTSBP07858 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
CTSBP07858 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTSBP07858 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTSBP07858 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTSBP07858 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.66■□□□□ 0.1
CTSBP07858 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CTSBP07858 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.66■□□□□ 0.1
CTSBP07858 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC15.66■□□□□ 0.1
CTSBP07858 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTSBP07858 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CTSBP07858 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CTSBP07858 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
CTSBP07858 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTSBP07858 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.65■□□□□ 0.1
CTSBP07858 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTSBP07858 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTSBP07858 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC15.65■□□□□ 0.1
CTSBP07858 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.65■□□□□ 0.1
CTSBP07858 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTSBP07858 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CTSBP07858 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTSBP07858 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTSBP07858 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CTSBP07858 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTSBP07858 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTSBP07858 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CTSBP07858 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
CTSBP07858 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CTSBP07858 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms