Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CTSDP07339 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CTSDP07339 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CTSDP07339 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC13.85□□□□□ -0.19
CTSDP07339 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CTSDP07339 AC006058.4-201ENST00000624016 1670 ntBASIC13.85□□□□□ -0.19
CTSDP07339 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CTSDP07339 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CTSDP07339 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.85□□□□□ -0.19
CTSDP07339 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CTSDP07339 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CTSDP07339 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
CTSDP07339 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CTSDP07339 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
CTSDP07339 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CTSDP07339 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CTSDP07339 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CTSDP07339 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CTSDP07339 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CTSDP07339 ACE-203ENST00000413513 2237 ntTSL 2 BASIC13.85□□□□□ -0.19
CTSDP07339 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CTSDP07339 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CTSDP07339 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CTSDP07339 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
CTSDP07339 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC13.85□□□□□ -0.19
CTSDP07339 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC13.85□□□□□ -0.19
CTSDP07339 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC13.85□□□□□ -0.19
CTSDP07339 LINC00982-205ENST00000420957 435 ntBASIC13.85□□□□□ -0.19
CTSDP07339 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC13.85□□□□□ -0.19
CTSDP07339 FAM210CP-201ENST00000445714 574 ntBASIC13.85□□□□□ -0.19
CTSDP07339 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC13.85□□□□□ -0.19
CTSDP07339 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC13.85□□□□□ -0.19
CTSDP07339 AC083849.1-201ENST00000615227 514 ntBASIC13.85□□□□□ -0.19
CTSDP07339 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CTSDP07339 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CTSDP07339 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CTSDP07339 LINC02447-202ENST00000501888 2146 ntBASIC13.85□□□□□ -0.19
CTSDP07339 AC073347.1-201ENST00000421633 2643 ntBASIC13.85□□□□□ -0.19
CTSDP07339 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CTSDP07339 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
CTSDP07339 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC13.85□□□□□ -0.19
CTSDP07339 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
CTSDP07339 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
CTSDP07339 AC112504.1-201ENST00000623415 1841 ntBASIC13.85□□□□□ -0.19
CTSDP07339 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
CTSDP07339 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.85□□□□□ -0.19
CTSDP07339 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
CTSDP07339 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CTSDP07339 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CTSDP07339 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.84□□□□□ -0.19
CTSDP07339 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CTSDP07339 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CTSDP07339 TOP3BP1-201ENST00000420768 1380 ntBASIC13.84□□□□□ -0.19
CTSDP07339 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CTSDP07339 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CTSDP07339 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CTSDP07339 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
CTSDP07339 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CTSDP07339 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CTSDP07339 AC004817.3-201ENST00000602957 2129 ntBASIC13.84□□□□□ -0.19
CTSDP07339 KRT8P39-201ENST00000396270 1433 ntBASIC13.84□□□□□ -0.19
CTSDP07339 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CTSDP07339 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
CTSDP07339 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CTSDP07339 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CTSDP07339 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC13.84□□□□□ -0.19
CTSDP07339 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC13.84□□□□□ -0.19
CTSDP07339 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CTSDP07339 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CTSDP07339 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
CTSDP07339 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC13.84□□□□□ -0.19
CTSDP07339 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC13.84□□□□□ -0.19
CTSDP07339 DUX4L26-201ENST00000489078 1255 ntBASIC13.84□□□□□ -0.19
CTSDP07339 S100A2-206ENST00000497140 697 ntTSL 2 BASIC13.84□□□□□ -0.19
CTSDP07339 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC13.84□□□□□ -0.19
CTSDP07339 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC13.84□□□□□ -0.19
CTSDP07339 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
CTSDP07339 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CTSDP07339 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
CTSDP07339 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC13.84□□□□□ -0.19
CTSDP07339 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
CTSDP07339 TP73-AS1-210ENST00000637775 1455 ntBASIC13.84□□□□□ -0.19
CTSDP07339 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CTSDP07339 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CTSDP07339 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CTSDP07339 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
CTSDP07339 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.84□□□□□ -0.19
CTSDP07339 LINC01144-201ENST00000626198 1710 ntBASIC13.84□□□□□ -0.19
CTSDP07339 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
CTSDP07339 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CTSDP07339 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
CTSDP07339 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
CTSDP07339 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CTSDP07339 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CTSDP07339 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CTSDP07339 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CTSDP07339 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.83□□□□□ -0.2
CTSDP07339 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC13.83□□□□□ -0.2
CTSDP07339 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CTSDP07339 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms