Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LMNAP02545 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LMNAP02545 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LMNAP02545 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.44■□□□□ 0.38
LMNAP02545 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.44■□□□□ 0.38
LMNAP02545 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LMNAP02545 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.44■□□□□ 0.38
LMNAP02545 AC245100.3-201ENST00000441281 285 ntBASIC17.44■□□□□ 0.38
LMNAP02545 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.44■□□□□ 0.38
LMNAP02545 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.44■□□□□ 0.38
LMNAP02545 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.44■□□□□ 0.38
LMNAP02545 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.44■□□□□ 0.38
LMNAP02545 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.44■□□□□ 0.38
LMNAP02545 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LMNAP02545 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LMNAP02545 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
LMNAP02545 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
LMNAP02545 AC133963.1-201ENST00000504166 1679 ntBASIC17.44■□□□□ 0.38
LMNAP02545 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.44■□□□□ 0.38
LMNAP02545 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.44■□□□□ 0.38
LMNAP02545 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.44■□□□□ 0.38
LMNAP02545 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LMNAP02545 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LMNAP02545 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LMNAP02545 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
LMNAP02545 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.44■□□□□ 0.38
LMNAP02545 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
LMNAP02545 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LMNAP02545 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
LMNAP02545 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.43■□□□□ 0.38
LMNAP02545 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LMNAP02545 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
LMNAP02545 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LMNAP02545 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LMNAP02545 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
LMNAP02545 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
LMNAP02545 AC003669.1-201ENST00000334569 611 ntBASIC17.43■□□□□ 0.38
LMNAP02545 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.43■□□□□ 0.38
LMNAP02545 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC17.43■□□□□ 0.38
LMNAP02545 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.43■□□□□ 0.38
LMNAP02545 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LMNAP02545 AC051619.7-201ENST00000568314 623 ntBASIC17.43■□□□□ 0.38
LMNAP02545 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
LMNAP02545 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
LMNAP02545 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LMNAP02545 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.43■□□□□ 0.38
LMNAP02545 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
LMNAP02545 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
LMNAP02545 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LMNAP02545 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LMNAP02545 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.43■□□□□ 0.38
LMNAP02545 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.43■□□□□ 0.38
LMNAP02545 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LMNAP02545 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.43■□□□□ 0.38
LMNAP02545 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
LMNAP02545 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LMNAP02545 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LMNAP02545 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LMNAP02545 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LMNAP02545 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LMNAP02545 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LMNAP02545 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LMNAP02545 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LMNAP02545 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.42■□□□□ 0.38
LMNAP02545 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
LMNAP02545 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LMNAP02545 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LMNAP02545 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LMNAP02545 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.42■□□□□ 0.38
LMNAP02545 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.42■□□□□ 0.38
LMNAP02545 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.42■□□□□ 0.38
LMNAP02545 UGT1A2P-201ENST00000454886 866 ntBASIC17.42■□□□□ 0.38
LMNAP02545 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.42■□□□□ 0.38
LMNAP02545 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.42■□□□□ 0.38
LMNAP02545 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.42■□□□□ 0.38
LMNAP02545 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.42■□□□□ 0.38
LMNAP02545 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC17.42■□□□□ 0.38
LMNAP02545 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.42■□□□□ 0.38
LMNAP02545 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LMNAP02545 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.42■□□□□ 0.38
LMNAP02545 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.42■□□□□ 0.38
LMNAP02545 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
LMNAP02545 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
LMNAP02545 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.42■□□□□ 0.38
LMNAP02545 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
LMNAP02545 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.42■□□□□ 0.38
LMNAP02545 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.42■□□□□ 0.38
LMNAP02545 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LMNAP02545 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LMNAP02545 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
LMNAP02545 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LMNAP02545 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LMNAP02545 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
LMNAP02545 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.41■□□□□ 0.38
LMNAP02545 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LMNAP02545 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LMNAP02545 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
LMNAP02545 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LMNAP02545 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
LMNAP02545 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms