Protein–RNA interactions for Protein: P01903

HLA-DRA, HLA class II histocompatibility antigen, DR alpha chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRAP01903 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.83■□□□□ 0.45
HLA-DRAP01903 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
HLA-DRAP01903 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC17.83■□□□□ 0.45
HLA-DRAP01903 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.83■□□□□ 0.45
HLA-DRAP01903 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
HLA-DRAP01903 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
HLA-DRAP01903 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DRAP01903 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
HLA-DRAP01903 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
HLA-DRAP01903 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.83■□□□□ 0.44
HLA-DRAP01903 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DRAP01903 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DRAP01903 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DRAP01903 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DRAP01903 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.83■□□□□ 0.44
HLA-DRAP01903 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
HLA-DRAP01903 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.83■□□□□ 0.44
HLA-DRAP01903 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.83■□□□□ 0.44
HLA-DRAP01903 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC17.83■□□□□ 0.44
HLA-DRAP01903 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC17.83■□□□□ 0.44
HLA-DRAP01903 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DRAP01903 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
HLA-DRAP01903 C20orf181-201ENST00000623918 480 ntBASIC17.83■□□□□ 0.44
HLA-DRAP01903 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DRAP01903 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DRAP01903 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DRAP01903 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.83■□□□□ 0.44
HLA-DRAP01903 LINC01144-201ENST00000626198 1710 ntBASIC17.83■□□□□ 0.44
HLA-DRAP01903 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.83■□□□□ 0.44
HLA-DRAP01903 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DRAP01903 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DRAP01903 AC092364.2-201ENST00000596710 2692 ntBASIC17.83■□□□□ 0.44
HLA-DRAP01903 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.83■□□□□ 0.44
HLA-DRAP01903 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DRAP01903 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HLA-DRAP01903 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.82■□□□□ 0.44
HLA-DRAP01903 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.82■□□□□ 0.44
HLA-DRAP01903 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.82■□□□□ 0.44
HLA-DRAP01903 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.82■□□□□ 0.44
HLA-DRAP01903 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DRAP01903 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
HLA-DRAP01903 WASH6P-202ENST00000359512 1437 ntBASIC17.82■□□□□ 0.44
HLA-DRAP01903 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DRAP01903 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
HLA-DRAP01903 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.82■□□□□ 0.44
HLA-DRAP01903 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.82■□□□□ 0.44
HLA-DRAP01903 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DRAP01903 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.82■□□□□ 0.44
HLA-DRAP01903 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DRAP01903 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC17.82■□□□□ 0.44
HLA-DRAP01903 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DRAP01903 KRT18P34-201ENST00000488218 1270 ntBASIC17.82■□□□□ 0.44
HLA-DRAP01903 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.82■□□□□ 0.44
HLA-DRAP01903 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.82■□□□□ 0.44
HLA-DRAP01903 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.82■□□□□ 0.44
HLA-DRAP01903 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
HLA-DRAP01903 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DRAP01903 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DRAP01903 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DRAP01903 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC17.82■□□□□ 0.44
HLA-DRAP01903 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
HLA-DRAP01903 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.82■□□□□ 0.44
HLA-DRAP01903 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DRAP01903 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
HLA-DRAP01903 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DRAP01903 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DRAP01903 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC17.82■□□□□ 0.44
HLA-DRAP01903 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HLA-DRAP01903 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DRAP01903 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.81■□□□□ 0.44
HLA-DRAP01903 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DRAP01903 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DRAP01903 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DRAP01903 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.81■□□□□ 0.44
HLA-DRAP01903 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.81■□□□□ 0.44
HLA-DRAP01903 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DRAP01903 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DRAP01903 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DRAP01903 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DRAP01903 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.81■□□□□ 0.44
HLA-DRAP01903 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.81■□□□□ 0.44
HLA-DRAP01903 BX842568.4-201ENST00000421222 227 ntBASIC17.81■□□□□ 0.44
HLA-DRAP01903 HTR5BP-201ENST00000430851 1154 ntBASIC17.81■□□□□ 0.44
HLA-DRAP01903 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
HLA-DRAP01903 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.81■□□□□ 0.44
HLA-DRAP01903 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.81■□□□□ 0.44
HLA-DRAP01903 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.81■□□□□ 0.44
HLA-DRAP01903 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.81■□□□□ 0.44
HLA-DRAP01903 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.81■□□□□ 0.44
HLA-DRAP01903 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.81■□□□□ 0.44
HLA-DRAP01903 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.81■□□□□ 0.44
HLA-DRAP01903 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.81■□□□□ 0.44
HLA-DRAP01903 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.81■□□□□ 0.44
HLA-DRAP01903 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DRAP01903 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DRAP01903 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DRAP01903 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DRAP01903 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
HLA-DRAP01903 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
HLA-DRAP01903 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms