Protein–RNA interactions for Protein: P01615

IGKV2D-28, Immunoglobulin kappa variable 2D-28, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-28P01615 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
IGKV2D-28P01615 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC11.05□□□□□ -0.64
IGKV2D-28P01615 AP005117.1-202ENST00000581724 1908 ntBASIC11.05□□□□□ -0.64
IGKV2D-28P01615 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC11.05□□□□□ -0.64
IGKV2D-28P01615 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
IGKV2D-28P01615 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC11.05□□□□□ -0.64
IGKV2D-28P01615 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
IGKV2D-28P01615 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
IGKV2D-28P01615 UBC-206ENST00000538617 1303 ntTSL 5 BASIC11.05□□□□□ -0.64
IGKV2D-28P01615 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
IGKV2D-28P01615 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
IGKV2D-28P01615 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 KRT18P38-201ENST00000449496 1282 ntBASIC11.04□□□□□ -0.64
IGKV2D-28P01615 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 AL135999.2-201ENST00000622438 1686 ntBASIC11.04□□□□□ -0.64
IGKV2D-28P01615 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
IGKV2D-28P01615 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
IGKV2D-28P01615 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
IGKV2D-28P01615 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
IGKV2D-28P01615 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
IGKV2D-28P01615 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
IGKV2D-28P01615 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
IGKV2D-28P01615 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC11.03□□□□□ -0.64
IGKV2D-28P01615 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC11.03□□□□□ -0.64
IGKV2D-28P01615 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
IGKV2D-28P01615 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
IGKV2D-28P01615 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
IGKV2D-28P01615 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
IGKV2D-28P01615 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
IGKV2D-28P01615 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
IGKV2D-28P01615 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
IGKV2D-28P01615 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
IGKV2D-28P01615 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms