Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
MBD3O95983 TERF1P1-201ENST00000311003 1181 ntBASIC19.09■□□□□ 0.65
MBD3O95983 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MBD3O95983 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MBD3O95983 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.09■□□□□ 0.65
MBD3O95983 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
MBD3O95983 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.09■□□□□ 0.65
MBD3O95983 SIGLEC29P-201ENST00000599873 1114 ntBASIC19.09■□□□□ 0.65
MBD3O95983 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.09■□□□□ 0.65
MBD3O95983 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC19.09■□□□□ 0.65
MBD3O95983 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
MBD3O95983 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MBD3O95983 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
MBD3O95983 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC19.09■□□□□ 0.65
MBD3O95983 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.09■□□□□ 0.65
MBD3O95983 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.09■□□□□ 0.65
MBD3O95983 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
MBD3O95983 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
MBD3O95983 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
MBD3O95983 SIGLEC16-201ENST00000599858 1437 ntBASIC19.08■□□□□ 0.65
MBD3O95983 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC19.08■□□□□ 0.65
MBD3O95983 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
MBD3O95983 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
MBD3O95983 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
MBD3O95983 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC19.08■□□□□ 0.65
MBD3O95983 INTS4P1-201ENST00000438455 1935 ntBASIC19.08■□□□□ 0.65
MBD3O95983 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
MBD3O95983 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
MBD3O95983 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MBD3O95983 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MBD3O95983 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MBD3O95983 MIR648-201ENST00000385046 94 ntBASIC19.08■□□□□ 0.64
MBD3O95983 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.08■□□□□ 0.64
MBD3O95983 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
MBD3O95983 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
MBD3O95983 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
MBD3O95983 AC091607.1-201ENST00000490318 1060 ntBASIC19.08■□□□□ 0.64
MBD3O95983 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.08■□□□□ 0.64
MBD3O95983 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.08■□□□□ 0.64
MBD3O95983 MIR4492-201ENST00000581627 80 ntBASIC19.08■□□□□ 0.64
MBD3O95983 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MBD3O95983 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.08■□□□□ 0.64
MBD3O95983 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MBD3O95983 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
MBD3O95983 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
MBD3O95983 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MBD3O95983 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.08■□□□□ 0.64
MBD3O95983 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MBD3O95983 GPAA1P2-202ENST00000606848 1787 ntBASIC19.08■□□□□ 0.64
MBD3O95983 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC19.08■□□□□ 0.64
MBD3O95983 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC19.08■□□□□ 0.64
MBD3O95983 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
MBD3O95983 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
MBD3O95983 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
MBD3O95983 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MBD3O95983 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
MBD3O95983 AC016027.1-202ENST00000607927 1699 ntBASIC19.08■□□□□ 0.64
MBD3O95983 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
MBD3O95983 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
MBD3O95983 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
MBD3O95983 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MBD3O95983 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
MBD3O95983 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
MBD3O95983 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
MBD3O95983 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
MBD3O95983 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC19.07■□□□□ 0.64
MBD3O95983 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
MBD3O95983 PRAL-201ENST00000624952 3286 ntBASIC19.07■□□□□ 0.64
MBD3O95983 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
MBD3O95983 AL590787.1-201ENST00000568856 1315 ntBASIC19.07■□□□□ 0.64
MBD3O95983 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC19.07■□□□□ 0.64
MBD3O95983 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
MBD3O95983 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MBD3O95983 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC19.07■□□□□ 0.64
MBD3O95983 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MBD3O95983 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
MBD3O95983 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
MBD3O95983 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.07■□□□□ 0.64
MBD3O95983 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.07■□□□□ 0.64
MBD3O95983 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
MBD3O95983 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
MBD3O95983 AC092647.4-201ENST00000457211 535 ntBASIC19.07■□□□□ 0.64
MBD3O95983 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.07■□□□□ 0.64
MBD3O95983 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.07■□□□□ 0.64
MBD3O95983 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.07■□□□□ 0.64
MBD3O95983 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC19.07■□□□□ 0.64
MBD3O95983 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
MBD3O95983 AP000867.4-201ENST00000641616 219 ntBASIC19.07■□□□□ 0.64
MBD3O95983 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
MBD3O95983 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MBD3O95983 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC19.07■□□□□ 0.64
MBD3O95983 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MBD3O95983 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
MBD3O95983 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
MBD3O95983 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
MBD3O95983 AC073508.3-201ENST00000619697 1419 ntBASIC19.07■□□□□ 0.64
MBD3O95983 AC023157.3-201ENST00000619086 2088 ntBASIC19.07■□□□□ 0.64
MBD3O95983 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
MBD3O95983 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
MBD3O95983 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms