Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SIX3O95343 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SIX3O95343 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.27■□□□□ 0.2
SIX3O95343 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SIX3O95343 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.27■□□□□ 0.2
SIX3O95343 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SIX3O95343 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SIX3O95343 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
SIX3O95343 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.27■□□□□ 0.2
SIX3O95343 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SIX3O95343 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.27■□□□□ 0.2
SIX3O95343 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
SIX3O95343 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.27■□□□□ 0.2
SIX3O95343 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.27■□□□□ 0.2
SIX3O95343 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.27■□□□□ 0.2
SIX3O95343 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.27■□□□□ 0.2
SIX3O95343 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.27■□□□□ 0.2
SIX3O95343 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.27■□□□□ 0.2
SIX3O95343 AC008667.4-201ENST00000607370 168 ntBASIC16.27■□□□□ 0.2
SIX3O95343 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SIX3O95343 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.27■□□□□ 0.2
SIX3O95343 GGTLC5P-201ENST00000617623 998 ntBASIC16.27■□□□□ 0.2
SIX3O95343 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SIX3O95343 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
SIX3O95343 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC16.27■□□□□ 0.2
SIX3O95343 GPAA1P2-202ENST00000606848 1787 ntBASIC16.27■□□□□ 0.2
SIX3O95343 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.27■□□□□ 0.19
SIX3O95343 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.27■□□□□ 0.19
SIX3O95343 AP002414.3-201ENST00000589352 1468 ntBASIC16.27■□□□□ 0.19
SIX3O95343 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.27■□□□□ 0.19
SIX3O95343 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SIX3O95343 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
SIX3O95343 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
SIX3O95343 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.27■□□□□ 0.19
SIX3O95343 AC022188.1-201ENST00000620960 1664 ntBASIC16.27■□□□□ 0.19
SIX3O95343 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SIX3O95343 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SIX3O95343 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SIX3O95343 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.27■□□□□ 0.19
SIX3O95343 AL365203.3-201ENST00000609742 2057 ntBASIC16.26■□□□□ 0.19
SIX3O95343 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SIX3O95343 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.26■□□□□ 0.19
SIX3O95343 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.26■□□□□ 0.19
SIX3O95343 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.26■□□□□ 0.19
SIX3O95343 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SIX3O95343 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.26■□□□□ 0.19
SIX3O95343 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SIX3O95343 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.26■□□□□ 0.19
SIX3O95343 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
SIX3O95343 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.26■□□□□ 0.19
SIX3O95343 FAM197Y8-203ENST00000450145 560 ntBASIC16.26■□□□□ 0.19
SIX3O95343 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.26■□□□□ 0.19
SIX3O95343 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.26■□□□□ 0.19
SIX3O95343 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.26■□□□□ 0.19
SIX3O95343 AL356488.2-201ENST00000602755 427 ntBASIC16.26■□□□□ 0.19
SIX3O95343 AC008735.5-201ENST00000623544 497 ntBASIC16.26■□□□□ 0.19
SIX3O95343 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SIX3O95343 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIX3O95343 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIX3O95343 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
SIX3O95343 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SIX3O95343 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIX3O95343 PCGF3-213ENST00000620529 1899 ntBASIC16.26■□□□□ 0.19
SIX3O95343 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIX3O95343 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SIX3O95343 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIX3O95343 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.26■□□□□ 0.19
SIX3O95343 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.26■□□□□ 0.19
SIX3O95343 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
SIX3O95343 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SIX3O95343 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIX3O95343 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
SIX3O95343 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.25■□□□□ 0.19
SIX3O95343 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIX3O95343 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.25■□□□□ 0.19
SIX3O95343 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.25■□□□□ 0.19
SIX3O95343 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIX3O95343 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.25■□□□□ 0.19
SIX3O95343 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SIX3O95343 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIX3O95343 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SIX3O95343 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SIX3O95343 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIX3O95343 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SIX3O95343 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.25■□□□□ 0.19
SIX3O95343 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIX3O95343 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIX3O95343 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SIX3O95343 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.25■□□□□ 0.19
SIX3O95343 AC018712.1-201ENST00000455767 687 ntBASIC16.25■□□□□ 0.19
SIX3O95343 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.25■□□□□ 0.19
SIX3O95343 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.25■□□□□ 0.19
SIX3O95343 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.25■□□□□ 0.19
SIX3O95343 IGHV3-65-201ENST00000523210 341 ntBASIC16.25■□□□□ 0.19
SIX3O95343 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIX3O95343 AC087641.1-201ENST00000557561 1021 ntBASIC16.25■□□□□ 0.19
SIX3O95343 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SIX3O95343 AC148477.8-201ENST00000624298 468 ntBASIC16.25■□□□□ 0.19
SIX3O95343 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SIX3O95343 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms