Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 AC092364.2-201ENST00000596710 2692 ntBASIC16.56■□□□□ 0.24
SUPT3HO75486 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SUPT3HO75486 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.56■□□□□ 0.24
SUPT3HO75486 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SUPT3HO75486 TCAF2P1-201ENST00000291129 2421 ntBASIC16.56■□□□□ 0.24
SUPT3HO75486 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.56■□□□□ 0.24
SUPT3HO75486 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SUPT3HO75486 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.56■□□□□ 0.24
SUPT3HO75486 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.56■□□□□ 0.24
SUPT3HO75486 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SUPT3HO75486 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SUPT3HO75486 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.56■□□□□ 0.24
SUPT3HO75486 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.56■□□□□ 0.24
SUPT3HO75486 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.56■□□□□ 0.24
SUPT3HO75486 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.56■□□□□ 0.24
SUPT3HO75486 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.56■□□□□ 0.24
SUPT3HO75486 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.56■□□□□ 0.24
SUPT3HO75486 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SUPT3HO75486 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SUPT3HO75486 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
SUPT3HO75486 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SUPT3HO75486 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
SUPT3HO75486 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.56■□□□□ 0.24
SUPT3HO75486 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.56■□□□□ 0.24
SUPT3HO75486 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
SUPT3HO75486 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SUPT3HO75486 LINC02228-204ENST00000642115 2962 ntBASIC16.56■□□□□ 0.24
SUPT3HO75486 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.56■□□□□ 0.24
SUPT3HO75486 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.55■□□□□ 0.24
SUPT3HO75486 AC006538.1-201ENST00000567905 1585 ntBASIC16.55■□□□□ 0.24
SUPT3HO75486 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SUPT3HO75486 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SUPT3HO75486 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SUPT3HO75486 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SUPT3HO75486 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SUPT3HO75486 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SUPT3HO75486 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SUPT3HO75486 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SUPT3HO75486 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SUPT3HO75486 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SUPT3HO75486 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SUPT3HO75486 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.55■□□□□ 0.24
SUPT3HO75486 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SUPT3HO75486 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SUPT3HO75486 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SUPT3HO75486 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SUPT3HO75486 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.55■□□□□ 0.24
SUPT3HO75486 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SUPT3HO75486 SCARNA2-201ENST00000458748 420 ntBASIC16.55■□□□□ 0.24
SUPT3HO75486 HLA-J-202ENST00000469281 1241 ntBASIC16.55■□□□□ 0.24
SUPT3HO75486 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.55■□□□□ 0.24
SUPT3HO75486 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SUPT3HO75486 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
SUPT3HO75486 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SUPT3HO75486 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.55■□□□□ 0.24
SUPT3HO75486 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.55■□□□□ 0.24
SUPT3HO75486 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.55■□□□□ 0.24
SUPT3HO75486 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.55■□□□□ 0.24
SUPT3HO75486 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.55■□□□□ 0.24
SUPT3HO75486 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.55■□□□□ 0.24
SUPT3HO75486 LINC01711-201ENST00000598340 967 ntBASIC16.55■□□□□ 0.24
SUPT3HO75486 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SUPT3HO75486 REXO1L6P-202ENST00000619970 1078 ntBASIC16.55■□□□□ 0.24
SUPT3HO75486 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SUPT3HO75486 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SUPT3HO75486 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.55■□□□□ 0.24
SUPT3HO75486 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SUPT3HO75486 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SUPT3HO75486 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SUPT3HO75486 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SUPT3HO75486 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.55■□□□□ 0.24
SUPT3HO75486 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.55■□□□□ 0.24
SUPT3HO75486 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SUPT3HO75486 AC006277.1-201ENST00000624348 1610 ntBASIC16.55■□□□□ 0.24
SUPT3HO75486 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SUPT3HO75486 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SUPT3HO75486 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
SUPT3HO75486 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SUPT3HO75486 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SUPT3HO75486 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SUPT3HO75486 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.55■□□□□ 0.24
SUPT3HO75486 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SUPT3HO75486 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SUPT3HO75486 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SUPT3HO75486 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SUPT3HO75486 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SUPT3HO75486 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SUPT3HO75486 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SUPT3HO75486 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SUPT3HO75486 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SUPT3HO75486 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SUPT3HO75486 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.54■□□□□ 0.24
SUPT3HO75486 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
SUPT3HO75486 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SUPT3HO75486 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.54■□□□□ 0.24
SUPT3HO75486 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.54■□□□□ 0.24
SUPT3HO75486 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SUPT3HO75486 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SUPT3HO75486 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.54■□□□□ 0.24
SUPT3HO75486 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms